CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA02799
(
Caenorhabditis japonica
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
CJA02799
T016857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA02799a
ARID/BRIGHT
26
112
KIAEFYNSLRMFYRRRWNAPLKLPHVQGVEVNLYRLYDTVMALGGWQKVASGEKWSDIAEMFGCKDDILCGDHAIKLIYMRYLSKFE
CJA02799a
RFX
605
673
EQLTEKWIKQNCVFEPNMSTARGELYAAYVDDLRNFYHSMSGSLAMFSGVMKNLYPEVNFRMAQNGIMI
CJA02799b
ARID/BRIGHT
26
112
KIAEFYNSLRMFYRRRWNAPLKLPHVQGVEVNLYRLYDTVMALGGWQKVASGEKWSDIAEMFGCKDDILCGDHAIKLIYMRYLSKFE
CJA02799b
RFX
605
673
EQLTEKWIKQNCVFEPNMSTARGELYAAYVDDLRNFYHSMSGSLAMFSGVMKNLYPEVNFRMAQNGIMI
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Caenorhabditis japonica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
swsn-7
Caenorhabditis elegans
WBGene00007433
N
0.922
CRE02039
Caenorhabditis remanei
CRE02039
N
0.909
CBG13351
Caenorhabditis briggsae
CBG13351
N
0.909
TELCIR_19453
Teladorsagia circumcincta
TELCIR_19453
N
0.711
DICVIV_08156
Dictyocaulus viviparus
DICVIV_08156
N
0.707