Afo_R010305 (Aptenodytes forsteri)
ARID/BRIGHT,RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
Afo_R010305 T016935_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R010305 ARID/BRIGHT 15 101
Afo_R010305 RFX 519 601

Links

Other ARID/BRIGHT,RFX family TFs
Other Aptenodytes forsteri TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_52175 Aegilops tauschii F775_52175 N 0.000
F775_28584 Aegilops tauschii F775_28584 I 0.000
F775_08647 Aegilops tauschii F775_08647 I 0.000
F775_00835 Aegilops tauschii F775_00835 I 0.000
AMTR_s00036p00107460 Amborella trichopoda AMTR_s00036p00107460 I 0.000
Aquca_034_00423 Aquilegia coerulea Aquca_034_00423 I 0.000
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.000
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.000
ATMYB86 Arabidopsis lyrata fgenesh2_kg.6__2630__AT5G26660.1 I 0.000
MYB55 Arabidopsis lyrata fgenesh2_kg.6__3543__AT4G01680.1 I 0.000
AtMYB19 Arabidopsis lyrata fgenesh2_kg.8__1111__AT5G52260.1 I 0.000
AtMYB45 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001377 I 0.000
AtMYB18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001401 I 0.000
MYB26 Arabidopsis thaliana AT3G13890 I 0.000
AtMYB45 Arabidopsis thaliana AT3G48920 I 0.000
MYB55 Arabidopsis thaliana AT4G01680 D 0.000
LAF1 Arabidopsis thaliana AT4G25560 I 0.000
MYB86 Arabidopsis thaliana AT5G26660 I 0.000
AtMYB19 Arabidopsis thaliana AT5G52260 I 0.000
Bostr.18473s0062 Boechera stricta Bostr.18473s0062 I 0.000
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.000
Bostr.4825s0008 Boechera stricta Bostr.4825s0008 I 0.000
Bostr.7305s0041 Boechera stricta Bostr.7305s0041 I 0.000
Bostr.7867s0367 Boechera stricta Bostr.7867s0367 I 0.000
Bostr.29827s0161 Boechera stricta Bostr.29827s0161 I 0.000
BRADI5G16672 Brachypodium distachyon BRADI5G16672 I 0.000
BRADI2G36730 Brachypodium distachyon BRADI2G36730 I 0.000
BRADI3G49970 Brachypodium distachyon BRADI3G49970 I 0.000
Bo7g095130 Brassica oleracea Bo7g095130 I 0.000
Bo1g040300 Brassica oleracea Bo1g040300 N 0.000
Bo2g156300 Brassica oleracea Bo2g156300 I 0.000
Bo3g023270 Brassica oleracea Bo3g023270 I 0.000
Bo7g110400 Brassica oleracea Bo7g110400 N 0.000
Bo8g077360 Brassica oleracea Bo8g077360 I 0.000
Bo9g004210 Brassica oleracea Bo9g004210 I 0.000
Bo9g010860 Brassica oleracea Bo9g010860 I 0.000
Bra013900 Brassica rapa Bra013900 N 0.000
Bra036588 Brassica rapa Bra036588 I 0.000
Bra036317 Brassica rapa Bra036317 I 0.000
Bra035097 Brassica rapa Bra035097 I 0.000
Bra019154 Brassica rapa Bra019154 N 0.000
Bra018027 Brassica rapa Bra018027 I 0.000
Bra029129 Brassica rapa Bra029129 I 0.000
PK18276.1 Cannabis sativa PK18276.1 I 0.000
Cagra.23492s0001 Capsella grandiflora Cagra.23492s0001 I 0.000
Cagra.2337s0007 Capsella grandiflora Cagra.2337s0007 I 0.000
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.000
Cagra.0334s0011 Capsella grandiflora Cagra.0334s0011 I 0.000
Cagra.0094s0035 Capsella grandiflora Cagra.0094s0035 I 0.000
Carubv10001224m.g Capsella rubella Carubv10001224m.g I 0.000
Carubv10001308m.g Capsella rubella Carubv10001308m.g I 0.000
Carubv10007732m.g Capsella rubella Carubv10007732m.g I 0.000
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.000
Carubv10027541m.g Capsella rubella Carubv10027541m.g I 0.000
Carubv10018592m.g Capsella rubella Carubv10018592m.g I 0.000
evm.TU.supercontig_107.47 Carica papaya evm.TU.supercontig_107.47 I 0.000
Ca_03589 Cicer arietinum Ca_03589 I 0.000
Ca_01055 Cicer arietinum Ca_01055 I 0.000
Ca_19758 Cicer arietinum Ca_19758 I 0.000
Ca_01072 Cicer arietinum Ca_01072 I 0.000
Ca_03564 Cicer arietinum Ca_03564 I 0.000
Cla001724 Citrullus lanatus Cla001724 I 0.000
Cla006288 Citrullus lanatus Cla006288 I 0.000
Ciclev10020144m.g Citrus clementina Ciclev10020144m.g I 0.000
Ciclev10006897m.g Citrus clementina Ciclev10006897m.g N 0.000
orange1.1g045400m.g Citrus sinensis orange1.1g045400m.g I 0.000
orange1.1g013300m.g Citrus sinensis orange1.1g013300m.g I 0.000
Cucsa.107740 Cucumis sativus Cucsa.107740 I 0.000
Cucsa.313950 Cucumis sativus Cucsa.313950 I 0.000
Cucsa.127860 Cucumis sativus Cucsa.127860 I 0.000
Eucgr.H01337 Eucalyptus grandis Eucgr.H01337 I 0.000
Eucgr.A00996 Eucalyptus grandis Eucgr.A00996 I 0.000
Eucgr.A02796 Eucalyptus grandis Eucgr.A02796 I 0.000
Eucgr.K00250 Eucalyptus grandis Eucgr.K00250 I 0.000
Eucgr.K00555 Eucalyptus grandis Eucgr.K00555 I 0.000
Thhalv10028778m.g Eutrema salsugineum Thhalv10028778m.g I 0.000
Thhalv10026022m.g Eutrema salsugineum Thhalv10026022m.g N 0.000
Thhalv10014388m.g Eutrema salsugineum Thhalv10014388m.g I 0.000
Thhalv10010657m.g Eutrema salsugineum Thhalv10010657m.g I 0.000
Thhalv10004450m.g Eutrema salsugineum Thhalv10004450m.g I 0.000
gene13281-v1.0-hybrid Fragaria vesca gene13281-v1.0-hybrid I 0.000
gene27001-v1.0-hybrid Fragaria vesca gene27001-v1.0-hybrid I 0.000
GLYMA10G38110 Glycine max GLYMA10G38110 I 0.000
GLYMA10G28250 Glycine max GLYMA10G28250 I 0.000
GLYMA10G27940 Glycine max GLYMA10G27940 I 0.000
GLYMA09G25655 Glycine max GLYMA09G25655 I 0.000
GLYMA03G38660 Glycine max GLYMA03G38660 I 0.000
GLYMA02G00960 Glycine max GLYMA02G00960 I 0.000
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.000
GLYMA19G41010 Glycine max GLYMA19G41010 I 0.000
GLYMA19G41250 Glycine max GLYMA19G41250 I 0.000
GLYMA03G38410 Glycine max GLYMA03G38410 I 0.000
GLYMA20G29710 Glycine max GLYMA20G29710 I 0.000
GLYMA20G22230 Glycine max GLYMA20G22230 I 0.000
Gorai.008G277900 Gossypium raimondii Gorai.008G277900 I 0.000
Gorai.007G118200 Gossypium raimondii Gorai.007G118200 I 0.000
Gorai.001G148500 Gossypium raimondii Gorai.001G148500 I 0.000
Gorai.004G147600 Gossypium raimondii Gorai.004G147600 I 0.000
Gorai.007G011100 Gossypium raimondii Gorai.007G011100 I 0.000
Gorai.008G133700 Gossypium raimondii Gorai.008G133700 I 0.000
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.000
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.000
MLOC_73614 Hordeum vulgare MLOC_73614 I 0.000
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.000
LPERR04G16000 Leersia perrieri LPERR04G16000 I 0.000
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.000
Lus10027458.g Linum usitatissimum Lus10027458.g I 0.000
Lus10038022.g Linum usitatissimum Lus10038022.g I 0.000
Lus10005739.g Linum usitatissimum Lus10005739.g I 0.000
Lus10005740.g Linum usitatissimum Lus10005740.g I 0.000
Lus10039213.g Linum usitatissimum Lus10039213.g I 0.000
chr5.CM0148.380.nc Lotus japonicus chr5.CM0148.380.nc I 0.000
chr5.CM0048.320.nd Lotus japonicus chr5.CM0048.320.nd I 0.000
chr5.CM0048.130.nc Lotus japonicus chr5.CM0048.130.nc I 0.000
chr1.CM0206.990.nd Lotus japonicus chr1.CM0206.990.nd I 0.000
chr1.CM0122.20.nc Lotus japonicus chr1.CM0122.20.nc I 0.000
MDP0000152575 Malus domestica MDP0000152575 I 0.000
MDP0000896053 Malus domestica MDP0000896053 I 0.000
cassava21326.m1 Manihot esculenta cassava21326.m1 I 0.000
cassava33008.m1 Manihot esculenta cassava33008.m1 I 0.000
cassava26284.m1 Manihot esculenta cassava26284.m1 I 0.000
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.000
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.000
MTR_1g085040 Medicago truncatula MTR_1g085040 I 0.000
MTR_1g100667 Medicago truncatula MTR_1g100667 I 0.000
MTR_1g085640 Medicago truncatula MTR_1g085640 I 0.000
MTR_7g110830 Medicago truncatula MTR_7g110830 I 0.000
mgf024107m Mimulus guttatus mgf024107m I 0.000
mgf024114m Mimulus guttatus mgf024114m I 0.000
GSMUA_Achr8G11340_001 Musa acuminata GSMUA_Achr8G11340_001 I 0.000
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.000
GSMUA_Achr2G01830_001 Musa acuminata GSMUA_Achr2G01830_001 I 0.000
GSMUA_Achr1G25120_001 Musa acuminata GSMUA_Achr1G25120_001 I 0.000
OBART02G25570 Oryza barthii OBART02G25570 I 0.000
OBART04G19730 Oryza barthii OBART04G19730 I 0.000
OBART07G15150 Oryza barthii OBART07G15150 I 0.000
OB02G32950 Oryza brachyantha OB02G32950 I 0.000
OB04G26810 Oryza brachyantha OB04G26810 I 0.000
ORGLA04G0168700 Oryza glaberrima ORGLA04G0168700 I 0.000
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.000
ORGLA10G0151700 Oryza glaberrima ORGLA10G0151700 I 0.000
OGLUM02G26100 Oryza glumaepatula OGLUM02G26100 I 0.000
OGLUM04G19590 Oryza glumaepatula OGLUM04G19590 I 0.000
BGIOSGA016820 Oryza indica BGIOSGA016820 I 0.000
BGIOSGA008698 Oryza indica BGIOSGA008698 I 0.000
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.000
OMERI04G16730 Oryza meridionalis OMERI04G16730 I 0.000
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.000
OMERI02G25080 Oryza meridionalis OMERI02G25080 I 0.000
ONIVA04G17950 Oryza nivara ONIVA04G17950 I 0.000
ONIVA02G28010 Oryza nivara ONIVA02G28010 I 0.000
OPUNC02G23410 Oryza punctata OPUNC02G23410 I 0.000
OPUNC04G17450 Oryza punctata OPUNC04G17450 I 0.000
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.000
ORUFI02G26980 Oryza rufipogon ORUFI02G26980 I 0.000
ORUFI04G21270 Oryza rufipogon ORUFI04G21270 I 0.000
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.000
OS07G0497500 Oryza sativa OS07G0497500 I 0.000
OS04G0532800 Oryza sativa OS04G0532800 I 0.000
Pavir.Ab02417 Panicum virgatum Pavir.Ab02417 I 0.000
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.000
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.000
Pavir.Ga00879 Panicum virgatum Pavir.Ga00879 I 0.000
Pavir.Gb00734 Panicum virgatum Pavir.Gb00734 I 0.000
PDK_20s1606731g001 Phoenix dactylifera PDK_20s1606731g001 I 0.000
e_gw1.211.99.1 Physcomitrella patens e_gw1.211.99.1 I 0.000
gw1.149.61.1 Physcomitrella patens gw1.149.61.1 I 0.000
POPTR_0002s18700 Populus trichocarpa POPTR_0002s18700 I 0.000
POPTR_0012s13260 Populus trichocarpa POPTR_0012s13260 I 0.000
POPTR_0014s10680 Populus trichocarpa POPTR_0014s10680 I 0.000
POPTR_0015s13190 Populus trichocarpa POPTR_0015s13190 I 0.000
Pm019344 Prunus mume Pm019344 I 0.000
PRUPE_ppa019729mg Prunus persica PRUPE_ppa019729mg I 0.000
SapurV1A.0754s0180 Salix purpurea SapurV1A.0754s0180 I 0.000
SapurV1A.1077s0040 Salix purpurea SapurV1A.1077s0040 I 0.000
SapurV1A.3474s0020 Salix purpurea SapurV1A.3474s0020 I 0.000
SapurV1A.0321s0070 Salix purpurea SapurV1A.0321s0070 I 0.000
SapurV1A.1253s0100 Salix purpurea SapurV1A.1253s0100 I 0.000
SELMODRAFT_437219 Selaginella moellendorffii SELMODRAFT_437219 I 0.000
Si012304m.g Setaria italica Si012304m.g I 0.000
Si017947m.g Setaria italica Si017947m.g I 0.000
Si030152m.g Setaria italica Si030152m.g I 0.000
Solyc01g102340.2 Solanum lycopersicum Solyc01g102340.2 I 0.000
PGSC0003DMG400018279 Solanum tuberosum PGSC0003DMG400018279 I 0.000
PGSC0003DMG400014291 Solanum tuberosum PGSC0003DMG400014291 I 0.000
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.000
Sb06g023610 Sorghum bicolor Sb06g023610 I 0.000
Sb04g033680 Sorghum bicolor Sb04g033680 I 0.000
Sb09g003100 Sorghum bicolor Sb09g003100 I 0.000
TCM_004965 Theobroma cacao TCM_004965 I 0.000
TCM_015157 Theobroma cacao TCM_015157 I 0.000
Traes_1DS_5BAD8947E Triticum aestivum Traes_1DS_5BAD8947E I 0.000
Traes_6DL_A014E9069 Triticum aestivum Traes_6DL_A014E9069 I 0.000
Traes_2BL_03F3475CD Triticum aestivum Traes_2BL_03F3475CD I 0.000
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I 0.000
Traes_2BL_604FE7639 Triticum aestivum Traes_2BL_604FE7639 I 0.000
Traes_2AL_962A9D448 Triticum aestivum Traes_2AL_962A9D448 I 0.000
Traes_1BS_92EA1F290 Triticum aestivum Traes_1BS_92EA1F290 I 0.000
Traes_2AL_2D4100475 Triticum aestivum Traes_2AL_2D4100475 I 0.000
Traes_2BL_35241DE8D Triticum aestivum Traes_2BL_35241DE8D I 0.000
Traes_1AS_1EE692FDC Triticum aestivum Traes_1AS_1EE692FDC I 0.000
Traes_6BL_CE61B9510 Triticum aestivum Traes_6BL_CE61B9510 I 0.000
Traes_6AL_D10CBA40D Triticum aestivum Traes_6AL_D10CBA40D I 0.000
Traes_2AL_AF9357B4C Triticum aestivum Traes_2AL_AF9357B4C N 0.000
Traes_2BL_7CEC6A8D7 Triticum aestivum Traes_2BL_7CEC6A8D7 I 0.000
TRIUR3_32691 Triticum urartu TRIUR3_32691 I 0.000
TRIUR3_26358 Triticum urartu TRIUR3_26358 I 0.000
TRIUR3_15020 Triticum urartu TRIUR3_15020 I 0.000
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.000
VIT_07s0005g02480 Vitis vinifera VIT_07s0005g02480 I 0.000
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.000
GRMZM2G496770 Zea mays GRMZM2G496770 I 0.000
GRMZM2G170049 Zea mays GRMZM2G170049 I 0.000
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.000