Gfo_R004053 (Geospiza fortis)
ARID/BRIGHT,RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
Gfo_R004053 T016937_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R004053 ARID/BRIGHT 15 101
Gfo_R004053 RFX 519 601

Links

Other ARID/BRIGHT,RFX family TFs
Other Geospiza fortis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_18251 Ancylostoma caninum ANCCAN_18251 N 0.000
BTMF_0000429201 Brugia timori BTMF_0000429201 I 0.000
CBN00465 Caenorhabditis brenneri CBN00465 N 0.000
CBN18395 Caenorhabditis brenneri CBN18395 N 0.000
CBN20968 Caenorhabditis brenneri CBN20968 N 0.000
CBN23808 Caenorhabditis brenneri CBN23808 N 0.000
CBG05522 Caenorhabditis briggsae CBG05522 N 0.000
lag-1 Caenorhabditis elegans WBGene00002245 N 0.000
CRE27979 Caenorhabditis remanei CRE27979 N 0.000
CRE16913 Caenorhabditis remanei CRE16913 N 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
NECAME_17145 Necator americanus NECAME_17145 I 0.000
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
SMUV_0001013801 Syphacia muris SMUV_0001013801 I 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000