CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g8401
(
Steinernema feltiae
)
ARID/BRIGHT,RFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
PF02257 (RFX_DNA_binding)
IPR001606
IPR003150
L889_g8401
T016981_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g8401.t1
ARID/BRIGHT
200
286
KTSEFYQSLNGFYRKKWGANLRIPSVDGFAFDLCKLYEVVMEHGGWQKVSSAEQWGDVAALLGFSQEIAVSSHAIKLLYMRYLSKYE
L889_g8401.t1
RFX
727
806
DVLTVRWIRKNCIPALGNSVNRGEVYAAYVNDMRTIYNSLSGSVVMFSNTLQTCFRDVAIKPCQKQGSSYGYTIEGIRFV
L889_g8401.t2
ARID/BRIGHT
200
286
KTSEFYQSLNGFYRKKWGANLRIPSVDGFAFDLCKLYEVVMEHGGWQKVSSAEQWGDVAALLGFSQEIAVSSHAIKLLYMRYLSKYE
L889_g8401.t2
RFX
727
806
DVLTVRWIRKNCIPALGNSVNRGEVYAAYVNDMRTIYNSLSGSVVMFSNTLQTCFRDVAIKPCQKQGSSYGYTIEGIRFV
Links
Other
ARID/BRIGHT,RFX
family TFs
Other
Steinernema feltiae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L898_g27620
Steinernema monticolum
L898_g27620
N
0.817
L892_g125
Steinernema scapterisci
L892_g125
N
0.707
L893_g19714
Steinernema glaseri
L893_g19714
N
0.706