GLYMA20G38761 (Glycine max)
ARID/BRIGHT,Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
GLYMA20G38761 T017031_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HMGB15
M06696_2.00
Arabidopsis thaliana
TWTAWWATAWRGTWTW

WAWACYWTATWWTAWA
Dap-seq
OMalley et al.(2016)
AT1G04880_col_a
0.758 0.758
HMGB15
M06697_2.00
Arabidopsis thaliana
TATAWHATATRGTWT

AWACYATATDWTATA
Dap-seq
OMalley et al.(2016)
AT1G04880_colamp_a
0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G38761.1 ARID/BRIGHT 37 122
GLYMA20G38761.1 Sox 265 332
GLYMA20G38761.2 ARID/BRIGHT 37 122
GLYMA20G38761.2 Sox 265 332

Links

Other ARID/BRIGHT,Sox family TFs
Other Glycine max TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VDBG_09240 Verticillium albo atrum VDBG_09240 N 0.000
NechaG45265 Fusarium solani NechaG45265 N 0.000
OCS_03672 Ophiocordyceps sinensis OCS_03672 N 0.000
PFICI_05072 Pestalotiopsis fici PFICI_05072 N 0.000
PV07_03085 Cladophialophora immunda PV07_03085 N 0.000
PVAR5_7652 Byssochlamys spectabilis PVAR5_7652 N 0.000
SAPIO_CDS7742 Scedosporium apiospermum SAPIO_CDS7742 N 0.000
VDAG_07398 Verticillium dahliae VDAG_07398 N 0.000
VDBG_09240 Verticillium alfalfae VDBG_09240 N 0.000
Z517_05565 Fonsecaea pedrosoi Z517_05565 N 0.000
MAPG_09245 Magnaporthe poae MAPG_09245 N 0.000
GGTG_12739 Gaeumannomyces graminis GGTG_12739 N 0.000
ACLA_076400 Aspergillus clavatus CADACLAG00006786 N 0.000
AFUA_2G17511 Aspergillus fumigatus CADAFUAG00004564 N 0.000
NFIA_092930 Neosartorya fischeri CADNFIAG00007525 N 0.000
CGGC5_10999 Colletotrichum gloeosporioides CGGC5_10999 N 0.000
CH063_11411 Colletotrichum higginsianum CH063_11411 N 0.000
Cob_00662 Colletotrichum orbiculare Cob_00662 N 0.000
CSUB01_08092 Colletotrichum sublineola CSUB01_08092 N 0.000
EURHEDRAFT_413664 Aspergillus ruber EURHEDRAFT_413664 N 0.000
G647_06217 Cladophialophora carrionii G647_06217 N 0.000
e_gw1.9.18.1 Nectria haematococca e_gw1.9.18.1 N 0.000