Bra025779 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra025779 T018895_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD

HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.766 0.766
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra025779.1-P B3 94 151

Links

Other B3 family TFs
Other Brassica rapa TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I 0.000
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.000
Alligator_sinensis_CCG002912.1 Alligator sinensis Alligator_sinensis_CCG002912.1 I 0.000
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.000
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I 0.000
ATF3 Anolis carolinensis ENSACAG00000006353 I 0.000
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.000
Afo_R004731 Aptenodytes forsteri Afo_R004731 I 0.000
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.000
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.000
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I 0.000
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I 0.000
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I 0.000
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.000
JDP2 Bos taurus ENSBTAG00000009451 I 0.000
ATF3 Bos taurus ENSBTAG00000008545 I 0.000
Brh_R009866 Buceros rhinoceros Brh_R009866 I 0.000
ATF3 Callithrix jacchus ENSCJAG00000015735 I 0.000
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.000
Aan_R005677 Calypte anna Aan_R005677 I 0.000
Aan_R011482 Calypte anna Aan_R011482 I 0.000
Aan_R000237 Calypte anna Aan_R000237 I 0.000
ATF3 Canis familiaris ENSCAFG00000012339 I 0.000
JDP2 Canis familiaris ENSCAFG00000017042 I 0.000
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I 0.000
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.000
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I 0.000
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.000
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I 0.000
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I 0.000
ENSCING00000002838 Ciona intestinalis ENSCING00000002838 I 0.000
atf3 Danio rerio ENSDARG00000007823 I 0.000
jdp2a Danio rerio ENSDARG00000040137 I 0.000
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.000
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I 0.000
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.000
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I 0.000
ATF3 Echinops telfairi ENSETEG00000015701 I 0.000
JDP2 Equus caballus ENSECAG00000014862 I 0.000
ATF3 Equus caballus ENSECAG00000011486 I 0.000
ATF3 Erinaceus europaeus ENSEEUG00000010993 I 0.000
ATF3 Felis catus ENSFCAG00000029636 I 0.000
JDP2 Felis catus ENSFCAG00000029464 I 0.000
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.000
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I 0.000
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I 0.000
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I 0.000
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I 0.000
ATF3 Gallus gallus ENSGALG00000025887 I 0.000
JDP2 Gallus gallus ENSGALG00000010322 I 0.000
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I 0.000
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I 0.000
atf3 Gasterosteus aculeatus ENSGACG00000011997 I 0.000
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.000
Gfo_R010939 Geospiza fortis Gfo_R010939 I 0.000
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.000
ATF3 Gorilla gorilla ENSGGOG00000014206 I 0.000
JDP2 Homo sapiens ENSG00000140044 D 0.000
ATF3 Homo sapiens ENSG00000162772 D 0.000
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.000
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I 0.000
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.000
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I 0.000
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.000
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I 0.000
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.000
ATF3 Loxodonta africana ENSLAFG00000032487 I 0.000
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.000
ENSP00000355954 Macaca fascicularis ENSP00000355954 I 0.000
ATF3 Macaca mulatta ENSMMUG00000012185 I 0.000
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I 0.000
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.000
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.000
ATF3 Meleagris gallopavo ENSMGAG00000009708 I 0.000
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.000
ATF3 Monodelphis domestica ENSMODG00000003042 I 0.000
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.000
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.000
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I 0.000
Atf3 Mus musculus ENSMUSG00000026628 D 0.000
Jdp2 Mus musculus ENSMUSG00000034271 D 0.000
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.000
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I 0.000
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.000
ATF3 Myotis lucifugus ENSMLUG00000015048 I 0.000
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.000
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I 0.000
ATF3 Ochotona princeps ENSOPRG00000013252 I 0.000
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.000
Ogr11165 Ophisaurus gracilis Ogr11165 I 0.000
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.000
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I 0.000
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I 0.000
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I 0.000
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I 0.000
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I 0.000
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.000
jdp2a Oryzias latipes ENSORLG00000016515 I 0.000
atf3 Oryzias latipes ENSORLG00000019980 I 0.000
jdp2b Oryzias latipes ENSORLG00000017506 I 0.000
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.000
ATF3 Otolemur garnettii ENSOGAG00000005803 I 0.000
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I 0.000
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.000
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.000
ATF3 Pan troglodytes ENSPTRG00000001962 I 0.000
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.000
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I 0.000
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I 0.000
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I 0.000
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I 0.000
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I 0.000
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I 0.000
Pvit_13387 Pogona vitticeps Pvit_13387 I 0.000
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.000
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I 0.000
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.000
ATF3 Procavia capensis ENSPCAG00000000178 I 0.000
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.000
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.000
Atf3 Rattus norvegicus ENSRNOG00000003745 I 0.000
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I 0.000
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.000
ATF3 Sus scrofa ENSSSCG00000015595 I 0.000
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.000
ATF3 Taeniopygia guttata ENSTGUG00000003050 I 0.000
jdp2b Takifugu rubripes ENSTRUG00000010344 I 0.000
atf3 Takifugu rubripes ENSTRUG00000015975 I 0.000
jdp2a Takifugu rubripes ENSTRUG00000018323 I 0.000
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I 0.000
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I 0.000
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I 0.000
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I 0.000
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.000
ATF3 Tupaia belangeri ENSTBEG00000002717 I 0.000
ATF3 Tursiops truncatus ENSTTRG00000013897 I 0.000
Tal_R002996 Tyto alba Tal_R002996 I 0.000
ATF3 Vicugna pacos ENSVPAG00000011563 I 0.000
atf3.L Xenopus laevis XB-GENE-6085256 I 0.000
atf3 Xenopus tropicalis XB-GENE-6085251 I 0.000
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I 0.000
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I 0.000
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I 0.000