CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0005s18090
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0005s18090
T020859_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0005s18090.1
B3
105
196
FVKSLVRSHVASCFWMGLPGTFCRAHLPSVDTTVTLQDECGKEFKMKYIAYKTGLSAGWRQFCVAHQLFEGDALVFQLTGSCTLKVYIIRAN
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0711s0090
Salix purpurea
SapurV1A.0711s0090
N
0.880
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
0.870
SapurV1A.0815s0020
Salix purpurea
SapurV1A.0815s0020
N
0.859
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
0.804
30115.m001183
Ricinus communis
30115.m001183
N
0.783
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
0.750
PK03938.1
Cannabis sativa
PK03938.1
N
0.739
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
0.707