CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000540m.g
(
Setaria italica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Si000540m.g
T021255_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000540m
B3
116
218
FCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLV
Links
Other
B3
family TFs
Other
Setaria italica
TFs
133 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G475263
Zea mays
GRMZM2G475263
N
1.000
Pavir.Eb00045
Panicum virgatum
Pavir.Eb00045
I
0.938
Pavir.Ea00026
Panicum virgatum
Pavir.Ea00026
I
0.929
Sb03g000530
Sorghum bicolor
Sb03g000530
I
0.929
OLONG_005875
Oryza longistaminata
OLONG_005875
I
0.908
OPUNC01G08500
Oryza punctata
OPUNC01G08500
I
0.908
ORGLA01G0077700
Oryza glaberrima
ORGLA01G0077700
I
0.908
OBART01G08640
Oryza barthii
OBART01G08640
I
0.908
ARF1
Oryza sativa
OS01G0236300
I
0.908
OGLUM01G09880
Oryza glumaepatula
OGLUM01G09880
I
0.908
BGIOSGA003093
Oryza indica
BGIOSGA003093
I
0.908
ORUFI01G09450
Oryza rufipogon
ORUFI01G09450
I
0.908
OMERI01G08660
Oryza meridionalis
OMERI01G08660
I
0.908
LPERR01G07680
Leersia perrieri
LPERR01G07680
I
0.907
ONIVA01G11220
Oryza nivara
ONIVA01G11220
N
0.906
MLOC_65945
Hordeum vulgare
MLOC_65945
I
0.888
OB01G18840
Oryza brachyantha
OB01G18840
N
0.888
TRIUR3_28704
Triticum urartu
TRIUR3_28704
I
0.888
TRAES3BF007300580CFD_g
Triticum aestivum
TRAES3BF007300580CFD_g
I
0.888
F775_21871
Aegilops tauschii
F775_21871
I
0.888
BRADI2G08120
Brachypodium distachyon
BRADI2G08120
N
0.857
orange1.1g005368m.g
Citrus sinensis
orange1.1g005368m.g
I
0.786
Ciclev10019174m.g
Citrus clementina
Ciclev10019174m.g
I
0.786
Gorai.007G109500
Gossypium raimondii
Gorai.007G109500
I
0.776
Solyc08g082630.2
Solanum lycopersicum
Solyc08g082630.2
I
0.773
Cucsa.303990
Cucumis sativus
Cucsa.303990
I
0.753
chr1.LjT43L07.10.nd
Lotus japonicus
chr1.LjT43L07.10.nd
I
0.740
PK07332.1
Cannabis sativa
PK07332.1
I
0.735
Gorai.008G126200
Gossypium raimondii
Gorai.008G126200
I
0.735
MDP0000194603
Malus domestica
MDP0000194603
I
0.735
Aquca_013_00067
Aquilegia coerulea
Aquca_013_00067
I
0.735
evm.TU.supercontig_96.40
Carica papaya
evm.TU.supercontig_96.40
I
0.735
VIT_15s0046g00290
Vitis vinifera
VIT_15s0046g00290
I
0.735
Cla011540
Citrullus lanatus
Cla011540
I
0.735
cassava29828.valid.m1
Manihot esculenta
cassava29828.valid.m1
I
0.735
BRADI5G10950
Brachypodium distachyon
BRADI5G10950
I
0.732
Gorai.007G044900
Gossypium raimondii
Gorai.007G044900
I
0.732
OB04G20880
Oryza brachyantha
OB04G20880
I
0.732
PGSC0003DMG400000118
Solanum tuberosum
PGSC0003DMG400000118
I
0.727
Solyc01g096070.2
Solanum lycopersicum
Solyc01g096070.2
I
0.727
PRUPE_ppa002230mg
Prunus persica
PRUPE_ppa002230mg
I
0.724
PRUPE_ppa002617mg
Prunus persica
PRUPE_ppa002617mg
I
0.724
POPTR_0002s17350
Populus trichocarpa
POPTR_0002s17350
I
0.724
Pm024149
Prunus mume
Pm024149
I
0.724
MDP0000139073
Malus domestica
MDP0000139073
I
0.724
SapurV1A.0003s1010
Salix purpurea
SapurV1A.0003s1010
I
0.724
Gorai.001G153900
Gossypium raimondii
Gorai.001G153900
I
0.724
gene19138-v1.0-hybrid
Fragaria vesca
gene19138-v1.0-hybrid
I
0.724
Pm018352
Prunus mume
Pm018352
I
0.724
cassava43609.valid.m1
Manihot esculenta
cassava43609.valid.m1
I
0.724
VIT_02s0025g01740
Vitis vinifera
VIT_02s0025g01740
I
0.724
TCM_005126
Theobroma cacao
TCM_005126
I
0.724
OMERI04G12260
Oryza meridionalis
OMERI04G12260
I
0.724
ONIVA04G11850
Oryza nivara
ONIVA04G11850
I
0.724
BGIOSGA016467
Oryza indica
BGIOSGA016467
I
0.724
OGLUM04G13380
Oryza glumaepatula
OGLUM04G13380
I
0.724
MTR_4g021580
Medicago truncatula
MTR_4g021580
I
0.724
Bo4g008150
Brassica oleracea
Bo4g008150
I
0.724
GSMUA_AchrUn_randomG11300_001
Musa acuminata
GSMUA_AchrUn_randomG11300_001
I
0.724
GLYMA16G02650
Glycine max
GLYMA16G02650
I
0.724
Bra004530
Brassica rapa
Bra004530
I
0.724
GLYMA07G06060
Glycine max
GLYMA07G06060
I
0.724
GLYMA03G41920
Glycine max
GLYMA03G41920
I
0.724
OPUNC04G11520
Oryza punctata
OPUNC04G11520
I
0.724
ARF9
Oryza sativa
OS04G0442000
I
0.724
ORUFI04G14900
Oryza rufipogon
ORUFI04G14900
I
0.724
ORGLA04G0107000
Oryza glaberrima
ORGLA04G0107000
I
0.724
AMTR_s00016p00168950
Amborella trichopoda
AMTR_s00016p00168950
I
0.722
Aquca_008_00175
Aquilegia coerulea
Aquca_008_00175
I
0.717
GRMZM2G137413
Zea mays
GRMZM2G137413
I
0.716
Pavir.Ab01961
Panicum virgatum
Pavir.Ab01961
I
0.716
Cucsa.114840
Cucumis sativus
Cucsa.114840
I
0.714
mgf005549m
Mimulus guttatus
mgf005549m
I
0.714
cassava45426.m1
Manihot esculenta
cassava45426.m1
I
0.714
cassava45425.m1
Manihot esculenta
cassava45425.m1
I
0.714
Cucsa.078800
Cucumis sativus
Cucsa.078800
I
0.714
Carubv10022841m.g
Capsella rubella
Carubv10022841m.g
I
0.714
evm.TU.supercontig_15.1
Carica papaya
evm.TU.supercontig_15.1
I
0.714
Bo8g097320
Brassica oleracea
Bo8g097320
I
0.714
Cagra.0050s0046
Capsella grandiflora
Cagra.0050s0046
I
0.714
Bostr.25993s0113
Boechera stricta
Bostr.25993s0113
I
0.714
Bra014419
Brassica rapa
Bra014419
I
0.714
cassava45424.m1
Manihot esculenta
cassava45424.m1
I
0.714
cassava42787.valid.m1
Manihot esculenta
cassava42787.valid.m1
I
0.714
Bo01141s010
Brassica oleracea
Bo01141s010
I
0.714
cassava45423.m1
Manihot esculenta
cassava45423.m1
I
0.714
ARF11
Arabidopsis lyrata
scaffold_403621.1
I
0.714
Thhalv10001365m.g
Eutrema salsugineum
Thhalv10001365m.g
I
0.714
ARF11
Arabidopsis thaliana
AT2G46530
I
0.714
ARF18
Arabidopsis thaliana
AT3G61830
I
0.714
GSMUA_Achr6G12780_001
Musa acuminata
GSMUA_Achr6G12780_001
I
0.714
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.714
cassava42788.valid.m1
Manihot esculenta
cassava42788.valid.m1
I
0.714
cassava42789.valid.m1
Manihot esculenta
cassava42789.valid.m1
I
0.714
cassava45422.m1
Manihot esculenta
cassava45422.m1
I
0.714
30068.m002516
Ricinus communis
30068.m002516
I
0.714
ARF18
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002633
I
0.714
Bo3g039330
Brassica oleracea
Bo3g039330
I
0.714
GSMUA_Achr10G15100_001
Musa acuminata
GSMUA_Achr10G15100_001
I
0.714
PDK_20s1869091g001
Phoenix dactylifera
PDK_20s1869091g001
I
0.711
POPTR_0001s13110
Populus trichocarpa
POPTR_0001s13110
I
0.711
orange1.1g005060m.g
Citrus sinensis
orange1.1g005060m.g
I
0.711
Ciclev10019257m.g
Citrus clementina
Ciclev10019257m.g
I
0.711
OLONG_013033
Oryza longistaminata
OLONG_013033
I
0.711
Traes_2BL_1AED96909
Triticum aestivum
Traes_2BL_1AED96909
I
0.711
GRMZM2G017187
Zea mays
GRMZM2G017187
I
0.708
OB02G28170
Oryza brachyantha
OB02G28170
I
0.705
Pavir.Gb01617
Panicum virgatum
Pavir.Gb01617
I
0.704
Pavir.Ga01750
Panicum virgatum
Pavir.Ga01750
I
0.704
Si009558m.g
Setaria italica
Si009558m.g
I
0.704
GLYMA03G17450
Glycine max
GLYMA03G17450
I
0.704
SapurV1A.0035s0230
Salix purpurea
SapurV1A.0035s0230
I
0.704
PK02218.1
Cannabis sativa
PK02218.1
I
0.704
Thhalv10005857m.g
Eutrema salsugineum
Thhalv10005857m.g
I
0.704
Sb06g017490
Sorghum bicolor
Sb06g017490
I
0.704
LjSGA_059323.1
Lotus japonicus
LjSGA_059323.1
I
0.704
POPTR_0001s10900
Populus trichocarpa
POPTR_0001s10900
I
0.704
PGSC0003DMG400012261
Solanum tuberosum
PGSC0003DMG400012261
I
0.704
gene25123-v1.0-hybrid
Fragaria vesca
gene25123-v1.0-hybrid
I
0.704
GLYMA01G25270
Glycine max
GLYMA01G25270
I
0.704
Gorai.007G026900
Gossypium raimondii
Gorai.007G026900
I
0.704
Gorai.003G078000
Gossypium raimondii
Gorai.003G078000
I
0.704
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.704
Lus10023058.g
Linum usitatissimum
Lus10023058.g
I
0.704
Bostr.13158s0186
Boechera stricta
Bostr.13158s0186
I
0.704
Cagra.0483s0062
Capsella grandiflora
Cagra.0483s0062
I
0.704
Carubv10018954m.g
Capsella rubella
Carubv10018954m.g
I
0.704
Lus10032413.g
Linum usitatissimum
Lus10032413.g
I
0.704
POPTR_0003s14200
Populus trichocarpa
POPTR_0003s14200
I
0.704
30128.m008545
Ricinus communis
30128.m008545
I
0.701
GRMZM2G378580
Zea mays
GRMZM2G378580
I
0.701
SapurV1A.0499s0060
Salix purpurea
SapurV1A.0499s0060
I
0.701
POPTR_0003s16210
Populus trichocarpa
POPTR_0003s16210
I
0.701