CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DL_896E50180
(
Triticum aestivum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Traes_2DL_896E50180
T021603_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NGA4
M06707_2.00
Arabidopsis thaliana
NHHBDYCAGGTRNHWH
DWDNYACCTGRHVDDN
Dap-seq
OMalley et al.(2016)
NGA4_col_a
0.821
0.821
RAV1
M01646_2.00
Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN
PBM
Weirauch et al.(2014)
pTH8592
0.786
0.786
AT1G51120
M01696_2.00
Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH8659
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DL_896E50180.1
B3
105
132
FDKVVTPSDVGKLNRLVIPKQHAEKYFP
Links
Other
B3
family TFs
Other
Triticum aestivum
TFs
345 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy