zbed4 (Danio rerio)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ENSDARG00000024306 T025943_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA binding activity; metal ion binding activity; and protein dimerization activity. Predicted to be located in nucleus. Orthologous to human ZBED4 (zinc finger BED-type containing 4). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000033717 BED ZF 205 253
ENSDARP00000033717 BED ZF 366 414
ENSDARP00000033717 BED ZF 537 584
ENSDARP00000033717 BED ZF 634 682
ENSDARP00000115355 BED ZF 205 253
ENSDARP00000115355 BED ZF 366 414
ENSDARP00000115355 BED ZF 537 584
ENSDARP00000115355 BED ZF 634 682

Links

Other BED ZF family TFs
Other Danio rerio TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLOCG00000017908 Lepisosteus oculatus ENSLOCG00000017908 N 0.983
ENSAMXG00000025839 Astyanax mexicanus ENSAMXG00000025839 N 0.977
ENSONIG00000009795 Oreochromis niloticus ENSONIG00000009795 N 0.972
zbed4 Tetraodon nigroviridis ENSTNIG00000006775 N 0.966
zbed4 Gasterosteus aculeatus ENSGACG00000019008 N 0.955
ENSPFOG00000020326 Poecilia formosa ENSPFOG00000020326 N 0.949
ENSXMAG00000019580 Xiphophorus maculatus ENSXMAG00000019580 N 0.949
ENSMEUG00000014660 Macropus eugenii ENSMEUG00000014660 N 0.903
ZBED4 Monodelphis domestica ENSMODG00000025433 N 0.903
ZBED4 Tursiops truncatus ENSTTRG00000009815 N 0.898
Zbed4 Mus musculus ENSMUSG00000034333 N 0.898
Afo_R004342 Aptenodytes forsteri Afo_R004342 N 0.898
Zbed4 Rattus norvegicus ENSRNOG00000004588 N 0.898
ENSSTOG00000023379 Ictidomys tridecemlineatus ENSSTOG00000023379 N 0.892
ENSLACG00000007168 Latimeria chalumnae ENSLACG00000007168 N 0.892
ZBED4 Loxodonta africana ENSLAFG00000017972 N 0.892
Tal_R001537 Tyto alba Tal_R001537 N 0.892
Aan_R000409 Calypte anna Aan_R000409 N 0.892
Brh_R004716 Buceros rhinoceros Brh_R004716 N 0.892
ENSGALG00000008547 Gallus gallus ENSGALG00000008547 N 0.892
ENSAPLG00000001579 Anas platyrhynchos ENSAPLG00000001579 N 0.892
ENSOCUG00000029472 Oryctolagus cuniculus ENSOCUG00000029472 N 0.890
ZBED4 Pan troglodytes ENSPTRG00000014522 N 0.886
ENSPSIG00000007193 Pelodiscus sinensis ENSPSIG00000007193 N 0.886
ENSP00000216268 Macaca fascicularis ENSP00000216268 N 0.886
ENSPPYG00000011967 Pongo abelii ENSPPYG00000011967 N 0.886
Gfo_R008679 Geospiza fortis Gfo_R008679 N 0.886
ZBED4 Otolemur garnettii ENSOGAG00000013251 N 0.886
ENSFALG00000015280 Ficedula albicollis ENSFALG00000015280 N 0.886
ENSPANG00000010852 Papio anubis ENSPANG00000010852 N 0.886
ENSCSAG00000019288 Chlorocebus sabaeus ENSCSAG00000019288 N 0.886
ENSCPOG00000007711 Cavia porcellus ENSCPOG00000007711 N 0.886
ZBED4 Canis familiaris ENSCAFG00000000714 N 0.886
ZBED4 Gorilla gorilla ENSGGOG00000009913 N 0.886
ZBED4 Homo sapiens ENSG00000100426 N 0.886
ZBED4 Macaca mulatta ENSMMUG00000018833 N 0.886
ENSNLEG00000018235 Nomascus leucogenys ENSNLEG00000018235 N 0.886
Myotis_brandtii_ZBED4_10004868 Myotis brandtii Myotis_brandtii_ZBED4_10004868 N 0.875
zbed4 Xenopus tropicalis XB-GENE-6076969 N 0.875
XP_002932233 Xenopus tropicalis XP_002932233 N 0.875
ENSMPUG00000018768 Mustela putorius furo ENSMPUG00000018768 N 0.875
Pvit_16079 Pogona vitticeps Pvit_16079 N 0.869
ZBED4 Anolis carolinensis ENSACAG00000009133 N 0.869
ZBED4 Dasypus novemcinctus ENSDNOG00000018932 N 0.869
ZBED4 Pteropus vampyrus ENSPVAG00000005134 N 0.824
zbed4 Oryzias latipes ENSORLG00000011603 N 0.722