CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pve_contig_1175-fgenesh-gene-0.0
(
Pythium vexans
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-pve_contig_1175-fgenesh-gene-0.0
T026921_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000023308
BED ZF
284
324
SVLWTHFRKDGANKRAVCKYCDHNMCGLVSRMRAHLARKCP
Links
Other
BED ZF
family TFs
Other
Pythium vexans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G001034
Pythium ultimum
PYU1_G001034
N
0.854
maker-pag1_scaffold_31-fgenesh-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_31-fgenesh-gene-0.11
N
0.829
fgenesh_scip_prom.28083.6295
Phytophthora lateralis
fgenesh_scip_prom.28083.6295
N
0.780
Phyra77862
Phytophthora ramorum
Phyra77862
N
0.780
snap-par_contig_928-abinit-gene-0.23
Pythium arrhenomanes
snap-par_contig_928-abinit-gene-0.23
N
0.780
snap_masked-piw_contig_1742-abinit-gene-0.10
Pythium iwayamai
snap_masked-piw_contig_1742-abinit-gene-0.10
N
0.756
ALNC14_026420
Albugo laibachii
ALNC14_026420
N
0.732
maker-pir_contig_1508-snap-gene-0.6
Pythium irregulare
maker-pir_contig_1508-snap-gene-0.6
N
0.707