CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra77862
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra77862
T027282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra77862
BED ZF
6
46
SPLWEHFRKDMANKRATCKYCDLNMCGLITRMRMHLARKCS
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.6295
Phytophthora lateralis
fgenesh_scip_prom.28083.6295
N
0.976
Physo137241
Phytophthora sojae
Physo137241
N
0.805
maker-pve_contig_1175-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_1175-fgenesh-gene-0.0
N
0.780
PYU1_G001034
Pythium ultimum
PYU1_G001034
N
0.780
maker-pag1_scaffold_31-fgenesh-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_31-fgenesh-gene-0.11
N
0.732
ALNC14_026420
Albugo laibachii
ALNC14_026420
N
0.707