OLONG_002006 (Oryza longistaminata)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OLONG_002006 T027088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_002006-R1 BED ZF 44 89
OLONG_002006-R1 BED ZF 182 222
OLONG_002006-R1 BED ZF 374 420
OLONG_002006-R1 BED ZF 479 524
OLONG_002006-R2 BED ZF 44 89
OLONG_002006-R2 BED ZF 182 222
OLONG_002006-R2 BED ZF 374 420
OLONG_002006-R2 BED ZF 479 524

Links

Other BED ZF family TFs
Other Oryza longistaminata TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA001450 Oryza indica BGIOSGA001450 N 0.994
OS01G0547200 Oryza sativa OS01G0547200 N 0.994
ORUFI01G21360 Oryza rufipogon ORUFI01G21360 N 0.994
ONIVA01G21500 Oryza nivara ONIVA01G21500 N 0.994
OBART01G18970 Oryza barthii OBART01G18970 N 0.988
OGLUM01G22570 Oryza glumaepatula OGLUM01G22570 N 0.982
OPUNC01G19360 Oryza punctata OPUNC01G19360 N 0.958
LPERR01G16460 Leersia perrieri LPERR01G16460 N 0.915
OB01G28790 Oryza brachyantha OB01G28790 N 0.885
Si000106m.g Setaria italica Si000106m.g N 0.835
Pavir.Eb01543 Panicum virgatum Pavir.Eb01543 N 0.809
Sb03g025310 Sorghum bicolor Sb03g025310 N 0.799