CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000217734
(
Malus domestica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
MDP0000217734
T028387_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000217734
BED ZF
18
66
DPAWKHCQMFKIGERVQLKCIYCNKLFKGGGIHRIKEHLAGQKGNASTC
Links
Other
BED ZF
family TFs
Other
Malus domestica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000276134
Malus domestica
MDP0000276134
N
1.000
30143.m001167
Ricinus communis
30143.m001167
N
0.929
Gorai.013G021900
Gossypium raimondii
Gorai.013G021900
N
0.929
gene26335-v1.0-hybrid
Fragaria vesca
gene26335-v1.0-hybrid
N
0.905
Lus10000517.g
Linum usitatissimum
Lus10000517.g
N
0.881
GLYMA11G34201
Glycine max
GLYMA11G34201
N
0.881
GLYMA18G04105
Glycine max
GLYMA18G04105
N
0.881
evm.TU.supercontig_1.434
Carica papaya
evm.TU.supercontig_1.434
N
0.833
Aquca_009_00913
Aquilegia coerulea
Aquca_009_00913
N
0.810
TCM_042727
Theobroma cacao
TCM_042727
N
0.810
TCM_002022
Theobroma cacao
TCM_002022
N
0.744
OB03G46220
Oryza brachyantha
OB03G46220
N
0.738
ORGLA03G0360400
Oryza glaberrima
ORGLA03G0360400
N
0.714
Gorai.001G093000
Gossypium raimondii
Gorai.001G093000
N
0.714
BGIOSGA013845
Oryza indica
BGIOSGA013845
N
0.714
OS03G0822900
Oryza sativa
OS03G0822900
N
0.714