SVE_1688100 (Strongyloides venezuelensis)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 SVE_1688100 T029733_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bed-3
M00587_2.00
Caenorhabditis elegans
TCGRGANY

RNTCYCGA
PBM
Narasimhan et al.(2015)
pTH9056
0.795 0.795
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_1688100.1 BED ZF 176 221

Links

Other BED ZF family TFs
Other Strongyloides venezuelensis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
bed-3 Caenorhabditis elegans WBGene00009133 D 0.795
NECAME_07822 Necator americanus NECAME_07822 I 0.795
nDi.2.2.2.g02831 Dirofilaria immitis nDi.2.2.2.g02831 I 0.773
nAv.1.0.1.g03085 Acanthocheilonema viteae nAv.1.0.1.g03085 I 0.773
L898_g15300 Steinernema monticolum L898_g15300 I 0.841
L893_g7390 Steinernema glaseri L893_g7390 I 0.841
L892_g25347 Steinernema scapterisci L892_g25347 I 0.841
L889_g10141 Steinernema feltiae L889_g10141 I 0.841
L596_g13737 Steinernema carpocapsae L596_g13737 I 0.841
WUBG_08027 Wuchereria bancrofti WUBG_08027 I 0.773
nLs.2.1.2.g03792 Litomosoides sigmodontis nLs.2.1.2.g03792 I 0.773
nOo.2.0.1.g00032 Onchocerca ochengi nOo.2.0.1.g00032 I 0.773
OESDEN_02515 Oesophagostomum dentatum OESDEN_02515 I 0.795
PEQ_0001129601 Parascaris equorum PEQ_0001129601 I 0.739
PTRK_0000487800 Parastrongyloides trichosuri PTRK_0000487800 I 1.000
RSKR_0000579600 Rhabditophanes kr3021 RSKR_0000579600 I 0.977
scaffold140-EXSNAP2012.77 Pristionchus exspectatus scaffold140-EXSNAP2012.77 I 0.773
SMUV_0001051801 Syphacia muris SMUV_0001051801 I 0.818
SPAL_0001677600 Strongyloides papillosus SPAL_0001677600 I 1.000
Hba_14997 Heterorhabditis bacteriophora Hba_14997 I 0.818
GPLIN_000014500 Globodera pallida GPLIN_000014500 I 0.773
Bm3595 Brugia malayi Bm3595 I 0.773
CBG03458 Caenorhabditis briggsae CBG03458 I 0.795
CBN11928 Caenorhabditis brenneri CBN11928 I 0.795
CBN28223 Caenorhabditis brenneri CBN28223 I 0.795
CJA17936 Caenorhabditis japonica CJA17936 I 0.795
CRE01489 Caenorhabditis remanei CRE01489 I 0.795
CRE29878 Caenorhabditis remanei CRE29878 I 0.795
LOAG_01923 Loa loa LOAG_01923 I 0.773
WBGene00241796 Onchocerca volvulus WBGene00241796 I 0.773
ALUE_0002184101 Ascaris lumbricoides ALUE_0002184101 I 0.795
ANCCEY_10600 Ancylostoma ceylanicum ANCCEY_10600 I 0.795
ASIM_0001651901 Anisakis simplex ASIM_0001651901 I 0.818
ASU_08993 Ascaris suum ASU_08993 I 0.818
CGOC_0000021801 Cylicostephanus goldi CGOC_0000021801 I 0.795
DME_0000322601 Dracunculus medinensis DME_0000322601 I 0.818
EVEC_0000803501 Enterobius vermicularis EVEC_0000803501 I 0.795
SSTP_0001230300 Strongyloides stercoralis SSTP_0001230300 I 1.000
BXY_0004700 Bursaphelenchus xylophilus BXY_0004700 N 0.705