CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT5G56960
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT5G56960
T030712_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK15505.1
M01125_2.00
Cannabis sativa
NRCACGTGYN
NRCACGTGYN
PBM
Lambert et al.(2019)
pTH10268
0.858
0.796
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G56960.1
bHLH
287
335
QLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQ
AT5G56960.2
bHLH
346
394
QLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy