Bo5g016490 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo5g016490 T031198_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01 		0.852 0.938
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g016490.1 bHLH 44 91

Links

Other bHLH family TFs
Other Brassica oleracea TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo01390s040 Brassica oleracea Bo01390s040 I 0.914
30147.m014419 Ricinus communis 30147.m014419 I 0.852
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.852
Pm024587 Prunus mume Pm024587 I 0.852
Pm016093 Prunus mume Pm016093 I 0.852
Cla002682 Citrullus lanatus Cla002682 I 0.852
Cla003283 Citrullus lanatus Cla003283 I 0.852
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.852
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.852
mgf015974m Mimulus guttatus mgf015974m I 0.852
mgf016462m Mimulus guttatus mgf016462m I 0.852
mgf012194m Mimulus guttatus mgf012194m I 0.852
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.852
Ca_01394 Cicer arietinum Ca_01394 I 0.852
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.852
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.852
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.852
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.852
TCM_014741 Theobroma cacao TCM_014741 I 0.852
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.852
Si026212m.g Setaria italica Si026212m.g I 0.852
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.852
Si001874m.g Setaria italica Si001874m.g I 0.852
TCM_017336 Theobroma cacao TCM_017336 I 0.852
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.852
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.852
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.852
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.852
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.852
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.852
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.852
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.852
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.852
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.852
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.852
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.852
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.852
MDP0000662999 Malus domestica MDP0000662999 I 0.852
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.852
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.852
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.852
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.852
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.852
PK06940.1 Cannabis sativa PK06940.1 I 0.852
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.852
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.852
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.852
MDP0000304669 Malus domestica MDP0000304669 I 0.852
MDP0000247912 Malus domestica MDP0000247912 I 0.852
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.852
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.852
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.852
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.852
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.852
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.852
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.852
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.852
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.852
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.852
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.852
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.852
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.852
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.852
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.852
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.852
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.852
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.852
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.852
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.852
F775_14780 Aegilops tauschii F775_14780 I 0.852
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.852
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.852
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.852
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.852
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.852
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.852
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.852
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.852
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.852
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.852
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.852
Bo00285s440 Brassica oleracea Bo00285s440 I 0.852
Bo5g016510 Brassica oleracea Bo5g016510 I 0.852
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.852
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.852
SCRM2 Arabidopsis thaliana AT1G12860 I 0.852
SCRM Arabidopsis thaliana AT3G26744 D 0.852
Bo7g083870 Brassica oleracea Bo7g083870 I 0.852
Bo8g065080 Brassica oleracea Bo8g065080 I 0.852
Bra032947 Brassica rapa Bra032947 I 0.852
Bra034246 Brassica rapa Bra034246 I 0.852
Bra025226 Brassica rapa Bra025226 I 0.852
Bra019794 Brassica rapa Bra019794 I 0.852
Bo9g008020 Brassica oleracea Bo9g008020 I 0.852
Bra016749 Brassica rapa Bra016749 I 0.852
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.852
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.852
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.852
OS01G0928000 Oryza sativa OS01G0928000 I 0.852
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.852
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.852
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.852
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.852
OS11G0523700 Oryza sativa OS11G0523700 I 0.852
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.852
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.852
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.852
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.852
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.852
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.852
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.852
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.852
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.852
OBART01G42600 Oryza barthii OBART01G42600 I 0.852
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.852
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.852
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.852
OBART11G15260 Oryza barthii OBART11G15260 I 0.852
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.852
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.852
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.852
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.852
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.852
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.852
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.852
Ca_23892 Cicer arietinum Ca_23892 I 0.841
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.841
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.841
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.841