Bra040483 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra040483 T031578_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra040483.1-P bHLH 166 217

Links

Other bHLH family TFs
Other Brassica rapa TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0050s0019 Capsella grandiflora Cagra.0050s0019 N 0.914
Thhalv10001803m.g Eutrema salsugineum Thhalv10001803m.g N 0.914
Bo4g197360 Brassica oleracea Bo4g197360 N 0.914
Carubv10023506m.g Capsella rubella Carubv10023506m.g N 0.914
BHLH70 Arabidopsis thaliana AT2G46810 N 0.914
Bra004505 Brassica rapa Bra004505 N 0.911
MTR_8g024210 Medicago truncatula MTR_8g024210 N 0.892
cassava39415.m1 Manihot esculenta cassava39415.m1 N 0.892
LPERR05G23220 Leersia perrieri LPERR05G23220 N 0.889
GSMUA_Achr2G22310_001 Musa acuminata GSMUA_Achr2G22310_001 N 0.889
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.884
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.884
Bo4g006950 Brassica oleracea Bo4g006950 N 0.881
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.868
GSMUA_Achr7G21110_001 Musa acuminata GSMUA_Achr7G21110_001 N 0.868
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.868
GSMUA_Achr7G21190_001 Musa acuminata GSMUA_Achr7G21190_001 N 0.868
Ca_00615 Cicer arietinum Ca_00615 N 0.868
Cucsa.254010 Cucumis sativus Cucsa.254010 N 0.868
FMA Vitis vinifera VIT_05s0029g00050 N 0.868
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.864
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.864
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.864
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.864
Carubv10001470m.g Capsella rubella Carubv10001470m.g N 0.864
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.864
Cagra.10175s0007 Capsella grandiflora Cagra.10175s0007 N 0.864
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.864
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.864
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.864
Ca_01453 Cicer arietinum Ca_01453 N 0.864
Bo5g038570 Brassica oleracea Bo5g038570 N 0.864
Bo7g057920 Brassica oleracea Bo7g057920 N 0.864
Bo8g071490 Brassica oleracea Bo8g071490 N 0.864
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.864
PK21294.1 Cannabis sativa PK21294.1 N 0.864
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.864
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.864
PK27921.1 Cannabis sativa PK27921.1 N 0.864
Bra040856 Brassica rapa Bra040856 N 0.864
Bra016377 Brassica rapa Bra016377 N 0.864
Cla022458 Citrullus lanatus Cla022458 N 0.864
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.864
Pm028748 Prunus mume Pm028748 N 0.861
30076.m004456 Ricinus communis 30076.m004456 N 0.861
PRUPE_ppa006041mg Prunus persica PRUPE_ppa006041mg N 0.861
Ca_22410 Cicer arietinum Ca_22410 N 0.861
bHLH071 Vitis vinifera VIT_02s0012g01450 N 0.861
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.861
VIT_15s0048g02510 Vitis vinifera VIT_15s0048g02510 N 0.861
Eucgr.H02788 Eucalyptus grandis Eucgr.H02788 N 0.861
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.861
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.861
MDP0000321049 Malus domestica MDP0000321049 N 0.861
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.861
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.861
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.861
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.861
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.861
GSMUA_Achr8G28400_001 Musa acuminata GSMUA_Achr8G28400_001 N 0.861
PK21055.1 Cannabis sativa PK21055.1 N 0.861
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.861
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.861
MDP0000829998 Malus domestica MDP0000829998 N 0.861
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N 0.861
GSMUA_Achr2G06030_001 Musa acuminata GSMUA_Achr2G06030_001 N 0.861
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.861
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N 0.861
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.861
GSMUA_Achr10G19180_001 Musa acuminata GSMUA_Achr10G19180_001 N 0.861
Sb09g030060 Sorghum bicolor Sb09g030060 N 0.858
Sb04g031250 Sorghum bicolor Sb04g031250 N 0.858
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.858
ORUFI05G29450 Oryza rufipogon ORUFI05G29450 N 0.858
Si017715m.g Setaria italica Si017715m.g N 0.858
Si036568m.g Setaria italica Si036568m.g N 0.858
Si021834m.g Setaria italica Si021834m.g N 0.858
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.858
Si017701m.g Setaria italica Si017701m.g N 0.858
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.858
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.858
OS10G0376900 Oryza sativa OS10G0376900 N 0.858
Si038653m.g Setaria italica Si038653m.g N 0.858
OS02G0691500 Oryza sativa OS02G0691500 N 0.858
OS05G0586300 Oryza sativa OS05G0586300 N 0.858
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.858
OS03G0188400 Oryza sativa OS03G0188400 N 0.858
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.858
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N 0.858
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.858
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N 0.858
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.858
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.858
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N 0.858
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.858
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N 0.858
Gorai.003G041800 Gossypium raimondii Gorai.003G041800 N 0.858
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.858
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.858
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.858
TCM_005028 Theobroma cacao TCM_005028 N 0.858
TCM_001031 Theobroma cacao TCM_001031 N 0.858
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.858
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N 0.858
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.858
Pavir.J03740 Panicum virgatum Pavir.J03740 N 0.858
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.858
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.858
Pavir.J04021 Panicum virgatum Pavir.J04021 N 0.858
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N 0.858
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.858
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.858
MLOC_45114 Hordeum vulgare MLOC_45114 N 0.858
LPERR04G19210 Leersia perrieri LPERR04G19210 N 0.858
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.858
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.858
LPERR02G23260 Leersia perrieri LPERR02G23260 N 0.858
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.858
MLOC_60291 Hordeum vulgare MLOC_60291 N 0.858
MLOC_67091 Hordeum vulgare MLOC_67091 N 0.858
OB05G34990 Oryza brachyantha OB05G34990 N 0.858
OB10G16200 Oryza brachyantha OB10G16200 N 0.858
OBART02G28630 Oryza barthii OBART02G28630 N 0.858
OB04G30380 Oryza brachyantha OB04G30380 N 0.858
OB03G16590 Oryza brachyantha OB03G16590 N 0.858
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.858
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.858
OB02G40170 Oryza brachyantha OB02G40170 N 0.858
GRMZM2G162450 Zea mays GRMZM2G162450 N 0.858
GRMZM2G111146 Zea mays GRMZM2G111146 N 0.858
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.858
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.858
BRADI2G22810 Brachypodium distachyon BRADI2G22810 N 0.858
BGIOSGA017471 Oryza indica BGIOSGA017471 N 0.858
BGIOSGA017025 Oryza indica BGIOSGA017025 N 0.858
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.858
BGIOSGA008846 Oryza indica BGIOSGA008846 N 0.858
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.858
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.858
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N 0.858
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.858
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.858
GRMZM2G091003 Zea mays GRMZM2G091003 N 0.858
F775_11253 Aegilops tauschii F775_11253 N 0.858
F775_03517 Aegilops tauschii F775_03517 N 0.858
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.858
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N 0.858
OBART02G33270 Oryza barthii OBART02G33270 N 0.858
OB02G35790 Oryza brachyantha OB02G35790 N 0.858
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N 0.858
ONIVA05G29540 Oryza nivara ONIVA05G29540 N 0.858
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.858
ONIVA04G22720 Oryza nivara ONIVA04G22720 N 0.858
ORGLA05G0238800 Oryza glaberrima ORGLA05G0238800 N 0.858
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.858
ONIVA04G03690 Oryza nivara ONIVA04G03690 N 0.858
OBART03G06470 Oryza barthii OBART03G06470 N 0.858
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.858
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.858
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.858
OPUNC04G21010 Oryza punctata OPUNC04G21010 N 0.858
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.858
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.858
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.858
OPUNC02G26270 Oryza punctata OPUNC02G26270 N 0.858
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.858
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.858
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.858
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N 0.858
OGLUM05G29000 Oryza glumaepatula OGLUM05G29000 N 0.858
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.858
OBART10G08120 Oryza barthii OBART10G08120 N 0.858
OBART04G23490 Oryza barthii OBART04G23490 N 0.858
OBART05G27490 Oryza barthii OBART05G27490 N 0.858
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.858
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.858
OMERI03G01350 Oryza meridionalis OMERI03G01350 N 0.858
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.858
OMERI05G23490 Oryza meridionalis OMERI05G23490 N 0.858
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N 0.858
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.858
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.858
OLONG_028191 Oryza longistaminata OLONG_028191 N 0.858
OPUNC05G25080 Oryza punctata OPUNC05G25080 N 0.858
Si007984m.g Setaria italica Si007984m.g N 0.857
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.856
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.856
PGSC0003DMG400017766 Solanum tuberosum PGSC0003DMG400017766 N 0.854
MDP0000229007 Malus domestica MDP0000229007 N 0.854
Bo8g097470 Brassica oleracea Bo8g097470 N 0.850
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.850
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.850
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.850
BHLH67 Arabidopsis thaliana AT3G61950 N 0.850
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.850
Bra007644 Brassica rapa Bra007644 N 0.850
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.850
Pavir.J15346 Panicum virgatum Pavir.J15346 N 0.845
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N 0.845
GRMZM2G086474 Zea mays GRMZM2G086474 N 0.845
Bra027958 Brassica rapa Bra027958 N 0.845
Bo9g055890 Brassica oleracea Bo9g055890 N 0.845
Si010485m.g Setaria italica Si010485m.g N 0.845