CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000011834
(
Latimeria chalumnae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLACG00000011834
T034831_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN
NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.914
0.960
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH
DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.914
0.960
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM
KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.914
0.960
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH
DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.914
0.960
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000013444
bHLH
18
67
KRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKTIDFLQKH
Links
Other
bHLH
family TFs
Other
Latimeria chalumnae
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy