PIF7 (Arabidopsis lyrata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 fgenesh1_pg.C_scaffold_8002119 T039088_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH72
M06743_2.00 		Arabidopsis thaliana
VCACGTGGSHHHHNS
SNDDDDSCCACGTGB		 Dap-seq
OMalley et al.(2016)
PIF7_col_a 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8002119 bHLH 211 259

Links

Other bHLH family TFs
Other Arabidopsis lyrata TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10027660m.g Capsella rubella Carubv10027660m.g I 0.914
Thhalv10004458m.g Eutrema salsugineum Thhalv10004458m.g I 0.914
Cagra.0542s0021 Capsella grandiflora Cagra.0542s0021 I 0.914
Bostr.26833s0112 Boechera stricta Bostr.26833s0112 I 0.914
BHLH72 Arabidopsis thaliana AT5G61270 D 0.914
Bra012972 Brassica rapa Bra012972 I 0.914
Bo7g098470 Brassica oleracea Bo7g098470 I 0.890