CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G22300_001
(
Musa acuminata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GSMUA_Achr9G22300_001
T040240_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN
NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.856
0.882
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P22300_001
bHLH
123
173
ATDSHSLAERARREKINARMKVLRELVPGCSKISGTTLLLDEIINHIKSLQ
Links
Other
bHLH
family TFs
Other
Musa acuminata
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_01s0244g00010
Vitis vinifera
VIT_01s0244g00010
I
0.881
MTR_7g092510
Medicago truncatula
MTR_7g092510
I
0.856
cassava39250.m1
Manihot esculenta
cassava39250.m1
I
0.856
Cucsa.242940
Cucumis sativus
Cucsa.242940
I
0.856
PRUPE_ppa007919mg
Prunus persica
PRUPE_ppa007919mg
I
0.856
TCM_024828
Theobroma cacao
TCM_024828
I
0.856
Cla017790
Citrullus lanatus
Cla017790
I
0.856
VIT_08s0007g07870
Vitis vinifera
VIT_08s0007g07870
I
0.856
AMTR_s00022p00231410
Amborella trichopoda
AMTR_s00022p00231410
I
0.856
cassava38223.valid.m1
Manihot esculenta
cassava38223.valid.m1
I
0.856
Ciclev10005087m.g
Citrus clementina
Ciclev10005087m.g
I
0.856
MDP0000248312
Malus domestica
MDP0000248312
I
0.856
orange1.1g015330m.g
Citrus sinensis
orange1.1g015330m.g
I
0.856
PK05923.1
Cannabis sativa
PK05923.1
D
0.856
chr1.CM0318.90.nd
Lotus japonicus
chr1.CM0318.90.nd
I
0.856
MDP0000183819
Malus domestica
MDP0000183819
I
0.856
Lus10040506.g
Linum usitatissimum
Lus10040506.g
I
0.856
evm.TU.supercontig_85.120
Carica papaya
evm.TU.supercontig_85.120
I
0.856
Gorai.002G229100
Gossypium raimondii
Gorai.002G229100
I
0.856
Gorai.007G361700
Gossypium raimondii
Gorai.007G361700
I
0.856
Cucsa.395400
Cucumis sativus
Cucsa.395400
I
0.855
Cla022995
Citrullus lanatus
Cla022995
I
0.855
Bra003300
Brassica rapa
Bra003300
I
0.843
Lus10011307.g
Linum usitatissimum
Lus10011307.g
I
0.843
Bra004679
Brassica rapa
Bra004679
I
0.843
Bra007358
Brassica rapa
Bra007358
I
0.843
Bo8g092230
Brassica oleracea
Bo8g092230
I
0.843
Bo6g073190
Brassica oleracea
Bo6g073190
I
0.843
BHLH48
Arabidopsis thaliana
AT2G42300
I
0.843
BHLH60
Arabidopsis thaliana
AT3G57800
I
0.843
Thhalv10006040m.g
Eutrema salsugineum
Thhalv10006040m.g
I
0.843
Bo4g015870
Brassica oleracea
Bo4g015870
I
0.843
Bra014603
Brassica rapa
Bra014603
I
0.843
fgenesh2_kg.4__2381__AT2G42300.1
Arabidopsis lyrata
fgenesh2_kg.4__2381__AT2G42300.1
I
0.843
Bostr.20903s0035
Boechera stricta
Bostr.20903s0035
I
0.843
GSMUA_Achr1G19610_001
Musa acuminata
GSMUA_Achr1G19610_001
I
0.843
GSMUA_Achr4G19330_001
Musa acuminata
GSMUA_Achr4G19330_001
I
0.843
GSMUA_Achr7G06330_001
Musa acuminata
GSMUA_Achr7G06330_001
I
0.843
Bostr.25993s0549
Boechera stricta
Bostr.25993s0549
I
0.843
Cagra.0210s0018
Capsella grandiflora
Cagra.0210s0018
I
0.843
Carubv10023618m.g
Capsella rubella
Carubv10023618m.g
I
0.843
Carubv10018503m.g
Capsella rubella
Carubv10018503m.g
I
0.843
Cagra.2636s0014
Capsella grandiflora
Cagra.2636s0014
I
0.843
TCM_008405
Theobroma cacao
TCM_008405
N
0.842