VIT_01s0244g00010 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_01s0244g00010 T046150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPE
M01700_2.00 		Arabidopsis thaliana
NCACGTNNN
NNNACGTGN		 PBM
Weirauch et al.(2014)
pTH7290 		0.844 0.863
BPE
M06726_2.00 		Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB
VWNNNNNCACGTGNNNNNNNN		 Dap-seq
OMalley et al.(2016)
bHLH31_col 		0.844 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_01s0244g00010.t01 bHLH 115 165

Links

Other bHLH family TFs
Other Vitis vinifera TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr9G22300_001 Musa acuminata GSMUA_Achr9G22300_001 I 0.881
Cla022995 Citrullus lanatus Cla022995 I 0.875
Cucsa.395400 Cucumis sativus Cucsa.395400 I 0.875
Eucgr.B00385 Eucalyptus grandis Eucgr.B00385 I 0.856
Carubv10017822m.g Capsella rubella Carubv10017822m.g I 0.854
Cagra.13768s0007 Capsella grandiflora Cagra.13768s0007 I 0.854
fgenesh1_pg.C_scaffold_5001270 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001270 I 0.854
Thhalv10004734m.g Eutrema salsugineum Thhalv10004734m.g I 0.851
Carubv10026916m.g Capsella rubella Carubv10026916m.g I 0.851
Cagra.4003s0049 Capsella grandiflora Cagra.4003s0049 I 0.851
Bostr.0568s0546 Boechera stricta Bostr.0568s0546 I 0.851
BHLH79 Arabidopsis thaliana AT5G62610 I 0.851
Bra035888 Brassica rapa Bra035888 I 0.851
Bo9g015060 Brassica oleracea Bo9g015060 I 0.851
fgenesh2_kg.8__2257__AT5G62610.1 Arabidopsis lyrata fgenesh2_kg.8__2257__AT5G62610.1 I 0.851
Eucgr.B03392 Eucalyptus grandis Eucgr.B03392 I 0.844
Eucgr.K02908 Eucalyptus grandis Eucgr.K02908 I 0.844
evm.TU.supercontig_203.5 Carica papaya evm.TU.supercontig_203.5 I 0.844
evm.TU.supercontig_5.303 Carica papaya evm.TU.supercontig_5.303 I 0.844
Ciclev10032412m.g Citrus clementina Ciclev10032412m.g I 0.844
Ciclev10021606m.g Citrus clementina Ciclev10021606m.g I 0.844
Carubv10020803m.g Capsella rubella Carubv10020803m.g I 0.844
gene09544-v1.0-hybrid Fragaria vesca gene09544-v1.0-hybrid I 0.844
Bostr.10040s0284 Boechera stricta Bostr.10040s0284 I 0.844
mgf024478m Mimulus guttatus mgf024478m I 0.844
Cagra.4331s0005 Capsella grandiflora Cagra.4331s0005 I 0.844
Lus10033120.g Linum usitatissimum Lus10033120.g I 0.844
SapurV1A.0161s0140 Salix purpurea SapurV1A.0161s0140 I 0.844
SapurV1A.0007s0010 Salix purpurea SapurV1A.0007s0010 I 0.844
orange1.1g024344m.g Citrus sinensis orange1.1g024344m.g I 0.844
SapurV1A.1596s0040 Salix purpurea SapurV1A.1596s0040 I 0.844
Thhalv10008474m.g Eutrema salsugineum Thhalv10008474m.g I 0.844
chr1.LjT06C08.10.nc Lotus japonicus chr1.LjT06C08.10.nc I 0.844
PK14657.1 Cannabis sativa PK14657.1 I 0.844
Thhalv10023643m.g Eutrema salsugineum Thhalv10023643m.g I 0.844
orange1.1g023847m.g Citrus sinensis orange1.1g023847m.g I 0.844
MDP0000299846 Malus domestica MDP0000299846 I 0.844
Lus10030807.g Linum usitatissimum Lus10030807.g I 0.844
Lus10013284.g Linum usitatissimum Lus10013284.g I 0.844
Gorai.008G053100 Gossypium raimondii Gorai.008G053100 I 0.844
Cucsa.197380 Cucumis sativus Cucsa.197380 I 0.844
MDP0000195579 Malus domestica MDP0000195579 I 0.844
MDP0000282600 Malus domestica MDP0000282600 I 0.844
MDP0000215269 Malus domestica MDP0000215269 I 0.844
MDP0000205807 Malus domestica MDP0000205807 I 0.844
Gorai.005G188700 Gossypium raimondii Gorai.005G188700 I 0.844
cassava19743.m1 Manihot esculenta cassava19743.m1 I 0.844
PGSC0003DMG401022600 Solanum tuberosum PGSC0003DMG401022600 I 0.844
MTR_8g062240 Medicago truncatula MTR_8g062240 I 0.844
GLYMA17G10290 Glycine max GLYMA17G10290 I 0.844
PGSC0003DMG401024463 Solanum tuberosum PGSC0003DMG401024463 I 0.844
POPTR_0010s04920 Populus trichocarpa POPTR_0010s04920 I 0.844
PRUPE_ppa009757mg Prunus persica PRUPE_ppa009757mg I 0.844
PRUPE_ppa009543mg Prunus persica PRUPE_ppa009543mg I 0.844
POPTR_0015s07930 Populus trichocarpa POPTR_0015s07930 I 0.844
GLYMA08G40541 Glycine max GLYMA08G40541 I 0.844
GLYMA06G20000 Glycine max GLYMA06G20000 I 0.844
Bra019935 Brassica rapa Bra019935 I 0.844
Bo5g010880 Brassica oleracea Bo5g010880 I 0.844
BPE Arabidopsis thaliana AT1G59640 D 0.844
GLYMA01G04610 Glycine max GLYMA01G04610 I 0.844
GLYMA02G02934 Glycine max GLYMA02G02934 I 0.844
GLYMA04G34660 Glycine max GLYMA04G34660 I 0.844
GLYMA02G02942 Glycine max GLYMA02G02942 I 0.844
Cucsa.005360 Cucumis sativus Cucsa.005360 I 0.844
ZCW32 Arabidopsis lyrata scaffold_200689.1 I 0.844
29736.m002076 Ricinus communis 29736.m002076 I 0.844
Pm024636 Prunus mume Pm024636 I 0.844
Pm006609 Prunus mume Pm006609 I 0.844
30147.m014038 Ricinus communis 30147.m014038 I 0.844
cassava1662.valid.m1 Manihot esculenta cassava1662.valid.m1 I 0.844
cassava23015.valid.m1 Manihot esculenta cassava23015.valid.m1 I 0.844
cassava22865.valid.m1 Manihot esculenta cassava22865.valid.m1 I 0.844
AMTR_s00133p00027110 Amborella trichopoda AMTR_s00133p00027110 I 0.844
Cla022234 Citrullus lanatus Cla022234 I 0.844
Cla019439 Citrullus lanatus Cla019439 I 0.844
VIT_01s0026g01140 Vitis vinifera VIT_01s0026g01140 I 0.844
TCM_045748 Theobroma cacao TCM_045748 I 0.844
TCM_045701 Theobroma cacao TCM_045701 I 0.844
Solyc05g006650.2 Solanum lycopersicum Solyc05g006650.2 I 0.844
VIT_17s0000g05370 Vitis vinifera VIT_17s0000g05370 I 0.844
Ca_17591 Cicer arietinum Ca_17591 I 0.844
Ca_19529 Cicer arietinum Ca_19529 I 0.844
PDK_20s1612611g001 Phoenix dactylifera PDK_20s1612611g001 I 0.843
GSMUA_Achr1G27010_001 Musa acuminata GSMUA_Achr1G27010_001 I 0.843
TCM_008405 Theobroma cacao TCM_008405 N 0.842