OMERI03G33580 (Oryza meridionalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OMERI03G33580 T042500_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PIF4
M08046_2.00 		Arabidopsis thaliana
CACGTGSV
BSCACGTG		 ChIP-seq
Mathelier et al.(2014)
MA0561.1 		0.855 0.889
PIF5
M08047_2.00 		Arabidopsis thaliana
YCACRTGS
SCAYGTGR		 ChIP-seq
Mathelier et al.(2014)
MA0562.1 		0.843 0.867
PIF5
M09452_2.00 		Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN		 Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062 		0.843 0.867
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI03G33580.1 bHLH 339 383

Links

Other bHLH family TFs
Other Oryza meridionalis TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa017228mg Prunus persica PRUPE_ppa017228mg I 0.858
POPTR_0005s22870 Populus trichocarpa POPTR_0005s22870 I 0.858
POPTR_0002s05630 Populus trichocarpa POPTR_0002s05630 I 0.858
OS12G0610200 Oryza sativa OS12G0610200 I 0.858
Sb01g006190 Sorghum bicolor Sb01g006190 I 0.858
Sb01g013843 Sorghum bicolor Sb01g013843 I 0.858
Si035110m.g Setaria italica Si035110m.g I 0.858
Si022196m.g Setaria italica Si022196m.g I 0.858
Sb08g021000 Sorghum bicolor Sb08g021000 I 0.858
OS03G0782500 Oryza sativa OS03G0782500 I 0.858
ORUFI03G37840 Oryza rufipogon ORUFI03G37840 I 0.858
OPUNC03G24740 Oryza punctata OPUNC03G24740 I 0.858
ONIVA12G17350 Oryza nivara ONIVA12G17350 I 0.858
ONIVA10G12820 Oryza nivara ONIVA10G12820 I 0.858
ONIVA03G28270 Oryza nivara ONIVA03G28270 I 0.858
OPUNC03G33340 Oryza punctata OPUNC03G33340 I 0.858
OPUNC12G16660 Oryza punctata OPUNC12G16660 I 0.858
ORUFI03G28150 Oryza rufipogon ORUFI03G28150 I 0.858
ORGLA12G0157200 Oryza glaberrima ORGLA12G0157200 I 0.858
ORGLA03G0333400 Oryza glaberrima ORGLA03G0333400 I 0.858
Si035819m.g Setaria italica Si035819m.g I 0.858
TCM_001913 Theobroma cacao TCM_001913 I 0.858
Pavir.J12143 Panicum virgatum Pavir.J12143 I 0.858
Pavir.J08053 Panicum virgatum Pavir.J08053 I 0.858
Pavir.Ib04022 Panicum virgatum Pavir.Ib04022 I 0.858
Pavir.Ia01219 Panicum virgatum Pavir.Ia01219 I 0.858
SapurV1A.0076s0230 Salix purpurea SapurV1A.0076s0230 I 0.858
PK12073.1 Cannabis sativa PK12073.1 I 0.858
PDK_20s1667271g001 Phoenix dactylifera PDK_20s1667271g001 I 0.858
PDK_20s1451901g001 Phoenix dactylifera PDK_20s1451901g001 I 0.858
LjSGA_030731.1 Lotus japonicus LjSGA_030731.1 I 0.858
Pavir.Ia00490 Panicum virgatum Pavir.Ia00490 I 0.858
orange1.1g007797m.g Citrus sinensis orange1.1g007797m.g I 0.858
Pm014785 Prunus mume Pm014785 I 0.858
Ca_21576 Cicer arietinum Ca_21576 I 0.858
Traes_5DL_026913547 Triticum aestivum Traes_5DL_026913547 I 0.858
Traes_5BL_054434680 Triticum aestivum Traes_5BL_054434680 I 0.858
Ciclev10031028m.g Citrus clementina Ciclev10031028m.g I 0.858
gene28785-v1.0-hybrid Fragaria vesca gene28785-v1.0-hybrid I 0.858
MDP0000254650 Malus domestica MDP0000254650 I 0.858
MDP0000198404 Malus domestica MDP0000198404 I 0.858
Gorai.006G008800 Gossypium raimondii Gorai.006G008800 I 0.858
OMERI12G13210 Oryza meridionalis OMERI12G13210 I 0.858
ORUFI12G20600 Oryza rufipogon ORUFI12G20600 I 0.858
GSMUA_Achr4G31770_001 Musa acuminata GSMUA_Achr4G31770_001 I 0.858
GRMZM2G165042 Zea mays GRMZM2G165042 I 0.858
GSMUA_Achr5G02280_001 Musa acuminata GSMUA_Achr5G02280_001 I 0.858
GSMUA_Achr6G31370_001 Musa acuminata GSMUA_Achr6G31370_001 I 0.858
LPERR12G15470 Leersia perrieri LPERR12G15470 I 0.858
LPERR03G22450 Leersia perrieri LPERR03G22450 I 0.858
GRMZM2G065374 Zea mays GRMZM2G065374 I 0.858
GLYMA08G41620 Glycine max GLYMA08G41620 I 0.858
BRADI1G13980 Brachypodium distachyon BRADI1G13980 I 0.858
BGIOSGA037775 Oryza indica BGIOSGA037775 I 0.858
BGIOSGA037772 Oryza indica BGIOSGA037772 I 0.858
F775_16112 Aegilops tauschii F775_16112 I 0.858
BGIOSGA013672 Oryza indica BGIOSGA013672 I 0.858
BGIOSGA013197 Oryza indica BGIOSGA013197 I 0.858
GLYMA18G14530 Glycine max GLYMA18G14530 I 0.858
OB03G43250 Oryza brachyantha OB03G43250 I 0.858
OGLUM12G20110 Oryza glumaepatula OGLUM12G20110 I 0.858
OBART12G18470 Oryza barthii OBART12G18470 I 0.858
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I 0.858
MTR_3g449770 Medicago truncatula MTR_3g449770 I 0.858
OBART03G36360 Oryza barthii OBART03G36360 I 0.858
OGLUM03G36070 Oryza glumaepatula OGLUM03G36070 I 0.858
OLONG_002577 Oryza longistaminata OLONG_002577 I 0.858
MLOC_7883 Hordeum vulgare MLOC_7883 I 0.858
OPUNC07G02800 Oryza punctata OPUNC07G02800 I 0.856
Si030028m.g Setaria italica Si030028m.g I 0.856
Traes_5AS_EBCEA6601 Triticum aestivum Traes_5AS_EBCEA6601 I 0.856
Solyc07g043580.2 Solanum lycopersicum Solyc07g043580.2 I 0.856
PGSC0003DMG401015926 Solanum tuberosum PGSC0003DMG401015926 I 0.856
F775_17713 Aegilops tauschii F775_17713 I 0.856
MLOC_71592 Hordeum vulgare MLOC_71592 I 0.856
Pavir.Bb00256 Panicum virgatum Pavir.Bb00256 I 0.856
Sb02g002760 Sorghum bicolor Sb02g002760 I 0.856
Pavir.Ba03888 Panicum virgatum Pavir.Ba03888 I 0.856
Bostr.20903s0139 Boechera stricta Bostr.20903s0139 I 0.855
Cagra.0202s0011 Capsella grandiflora Cagra.0202s0011 I 0.855
Cagra.0216s0013 Capsella grandiflora Cagra.0216s0013 I 0.855
Bostr.25993s0478 Boechera stricta Bostr.25993s0478 I 0.855
Bra037742 Brassica rapa Bra037742 I 0.855
Bo8g093060 Brassica oleracea Bo8g093060 I 0.855
Pavir.Cb00224 Panicum virgatum Pavir.Cb00224 I 0.855
Bra007430 Brassica rapa Bra007430 I 0.855
Carubv10023275m.g Capsella rubella Carubv10023275m.g I 0.855
Carubv10017267m.g Capsella rubella Carubv10017267m.g I 0.855
PIF4 Arabidopsis lyrata fgenesh2_kg.4__2461__AT2G43010.2 I 0.855
PIF4 Arabidopsis thaliana AT2G43010 D 0.855
PIL6 Arabidopsis lyrata scaffold_503108.1 I 0.855
Bo3g036300 Brassica oleracea Bo3g036300 I 0.855
Thhalv10016715m.g Eutrema salsugineum Thhalv10016715m.g I 0.855
Thhalv10005929m.g Eutrema salsugineum Thhalv10005929m.g I 0.855
Eucgr.K03592 Eucalyptus grandis Eucgr.K03592 I 0.846
Aquca_026_00376 Aquilegia coerulea Aquca_026_00376 I 0.846
BRADI1G06670 Brachypodium distachyon BRADI1G06670 I 0.846
VIT_12s0028g01110 Vitis vinifera VIT_12s0028g01110 I 0.846
SapurV1A.0289s0130 Salix purpurea SapurV1A.0289s0130 I 0.846
PGSC0003DMG400014705 Solanum tuberosum PGSC0003DMG400014705 I 0.846
GRMZM5G865967 Zea mays GRMZM5G865967 I 0.846
F775_31861 Aegilops tauschii F775_31861 I 0.846
TRIUR3_14996 Triticum urartu TRIUR3_14996 I 0.846
OS07G0143200 Oryza sativa OS07G0143200 I 0.844
ORGLA07G0023700 Oryza glaberrima ORGLA07G0023700 I 0.844
BGIOSGA025137 Oryza indica BGIOSGA025137 I 0.844
ORUFI07G02530 Oryza rufipogon ORUFI07G02530 I 0.844
OBART07G02670 Oryza barthii OBART07G02670 I 0.844
OMERI07G01290 Oryza meridionalis OMERI07G01290 I 0.844
ONIVA07G01070 Oryza nivara ONIVA07G01070 I 0.844
PIF5 Arabidopsis thaliana AT3G59060 D 0.843
Traes_2DL_A84C58DC2 Triticum aestivum Traes_2DL_A84C58DC2 I 0.843
Traes_2BL_C594B831F Triticum aestivum Traes_2BL_C594B831F I 0.843
Traes_2AL_892B4448E Triticum aestivum Traes_2AL_892B4448E I 0.843
MLOC_77331 Hordeum vulgare MLOC_77331 I 0.843
Bo4g108070 Brassica oleracea Bo4g108070 I 0.843
TRIUR3_34817 Triticum urartu TRIUR3_34817 I 0.843
F775_01586 Aegilops tauschii F775_01586 I 0.843
BRADI1G58230 Brachypodium distachyon BRADI1G58230 I 0.843
AMTR_s00039p00032460 Amborella trichopoda AMTR_s00039p00032460 I 0.842
OB07G12160 Oryza brachyantha OB07G12160 I 0.841
Eucgr.A02043 Eucalyptus grandis Eucgr.A02043 I 0.838