CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0019s10900
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0019s10900
T043926_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s10900.1
bHLH
192
223
ATHPRSIAERVRRTRISDRIRKLQELVPNMDK
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla003934
Citrullus lanatus
Cla003934
N
0.914
cassava38615.m1
Manihot esculenta
cassava38615.m1
N
0.914
POPTR_0013s11200
Populus trichocarpa
POPTR_0013s11200
N
0.914
TCM_036484
Theobroma cacao
TCM_036484
I
0.914
Gorai.013G138300
Gossypium raimondii
Gorai.013G138300
I
0.902
Gorai.006G140200
Gossypium raimondii
Gorai.006G140200
I
0.882
GRMZM2G114873
Zea mays
GRMZM2G114873
I
0.882
GRMZM2G137426
Zea mays
GRMZM2G137426
N
0.879
MTR_4g033295
Medicago truncatula
MTR_4g033295
I
0.861
Eucgr.J00796
Eucalyptus grandis
Eucgr.J00796
I
0.859
MDP0000264179
Malus domestica
MDP0000264179
N
0.848
AMTR_s00005p00255540
Amborella trichopoda
AMTR_s00005p00255540
N
0.841