Cla008090 (Citrullus lanatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cla008090 T046952_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla008090 bHLH 101 151

Links

Other bHLH family TFs
Other Citrullus lanatus TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27469.m000162 Ricinus communis 27469.m000162 I 0.857
29974.m000242 Ricinus communis 29974.m000242 I 0.848
30066.m000713 Ricinus communis 30066.m000713 N 0.856
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I 0.861
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I 0.869
BGIOSGA000262 Oryza indica BGIOSGA000262 I 0.855
BHLH75 Arabidopsis thaliana AT1G25330 I 0.881
Bo3g138670 Brassica oleracea Bo3g138670 I 0.894
Bostr.12659s0424 Boechera stricta Bostr.12659s0424 I 0.894
Bra010993 Brassica rapa Bra010993 I 0.894
BRADI2G58630 Brachypodium distachyon BRADI2G58630 I 0.855
Cagra.2231s0025 Capsella grandiflora Cagra.2231s0025 N 0.870
Carubv10010961m.g Capsella rubella Carubv10010961m.g N 0.870
cassava14677.m1 Manihot esculenta cassava14677.m1 I 0.891
cassava46189.m1 Manihot esculenta cassava46189.m1 I 0.891
cassava6194.valid.m1 Manihot esculenta cassava6194.valid.m1 I 0.857
cassava64.valid.m1 Manihot esculenta cassava64.valid.m1 I 0.857
Ca_13025 Cicer arietinum Ca_13025 I 0.845
chr2.CM0903.30.nd Lotus japonicus chr2.CM0903.30.nd I 0.866
Ciclev10016461m.g Citrus clementina Ciclev10016461m.g N 0.859
Cla018783 Citrullus lanatus Cla018783 I 0.848
Cla019256 Citrullus lanatus Cla019256 I 0.848
Cucsa.111110 Cucumis sativus Cucsa.111110 I 0.848
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I 0.848
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I 0.848
evm.TU.supercontig_282.7 Carica papaya evm.TU.supercontig_282.7 I 0.845
evm.TU.supercontig_65.44 Carica papaya evm.TU.supercontig_65.44 I 0.894
gene03713-v1.0-hybrid Fragaria vesca gene03713-v1.0-hybrid N 0.894
GLYMA07G10311 Glycine max GLYMA07G10311 I 0.845
GLYMA09G31580 Glycine max GLYMA09G31580 I 0.845
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I 0.848
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I 0.848
Gorai.008G055400 Gossypium raimondii Gorai.008G055400 I 0.858
GRMZM2G030762 Zea mays GRMZM2G030762 I 0.855
GRMZM2G180406 Zea mays GRMZM2G180406 I 0.855
GSMUA_Achr10G28920_001 Musa acuminata GSMUA_Achr10G28920_001 I 0.855
GSMUA_Achr7G02770_001 Musa acuminata GSMUA_Achr7G02770_001 I 0.855
GSMUA_Achr7G22770_001 Musa acuminata GSMUA_Achr7G22770_001 I 0.855
GSMUA_Achr8G24490_001 Musa acuminata GSMUA_Achr8G24490_001 I 0.855
LPERR01G36170 Leersia perrieri LPERR01G36170 I 0.855
Lus10009034.g Linum usitatissimum Lus10009034.g I 0.845
Lus10009673.g Linum usitatissimum Lus10009673.g I 0.845
Lus10017602.g Linum usitatissimum Lus10017602.g I 0.857
Lus10033562.g Linum usitatissimum Lus10033562.g I 0.857
MDP0000725991 Malus domestica MDP0000725991 I 0.894
MDP0000879337 Malus domestica MDP0000879337 I 0.848
mgf013353m Mimulus guttatus mgf013353m I 0.848
mgf017044m Mimulus guttatus mgf017044m I 0.873
mgf026269m Mimulus guttatus mgf026269m N 0.891
MLOC_43438 Hordeum vulgare MLOC_43438 I 0.855
OB01G50400 Oryza brachyantha OB01G50400 I 0.855
OBART01G41700 Oryza barthii OBART01G41700 I 0.855
OGLUM01G45850 Oryza glumaepatula OGLUM01G45850 I 0.855
OLONG_001206 Oryza longistaminata OLONG_001206 I 0.855
OMERI01G38640 Oryza meridionalis OMERI01G38640 I 0.855
ONIVA01G46800 Oryza nivara ONIVA01G46800 I 0.855
OPUNC01G40520 Oryza punctata OPUNC01G40520 I 0.855
orange1.1g042908m.g Citrus sinensis orange1.1g042908m.g I 0.894
ORGLA01G0356500 Oryza glaberrima ORGLA01G0356500 I 0.855
ORUFI01G45060 Oryza rufipogon ORUFI01G45060 I 0.855
OS01G0915600 Oryza sativa OS01G0915600 I 0.855
Pavir.J34352 Panicum virgatum Pavir.J34352 I 0.855
PDK_20s1640771g001 Phoenix dactylifera PDK_20s1640771g001 I 0.855
Pm025178 Prunus mume Pm025178 I 0.848
Pm029081 Prunus mume Pm029081 I 0.894
POPTR_0004s09850 Populus trichocarpa POPTR_0004s09850 I 0.857
POPTR_0005s15590 Populus trichocarpa POPTR_0005s15590 I 0.857
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I 0.848
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I 0.848
PRUPE_ppa010885mg Prunus persica PRUPE_ppa010885mg I 0.894
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I 0.848
SapurV1A.0101s0180 Salix purpurea SapurV1A.0101s0180 I 0.857
SapurV1A.0315s0030 Salix purpurea SapurV1A.0315s0030 I 0.857
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I 0.848
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I 0.848
SapurV1A.0781s0030 Salix purpurea SapurV1A.0781s0030 I 0.857
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I 0.848
SapurV1A.4333s0010 Salix purpurea SapurV1A.4333s0010 I 0.857
Sb03g043690 Sorghum bicolor Sb03g043690 I 0.855
Si001242m.g Setaria italica Si001242m.g I 0.855
Solyc04g007300.2 Solanum lycopersicum Solyc04g007300.2 I 0.891
TCM_012362 Theobroma cacao TCM_012362 I 0.848
TCM_019445 Theobroma cacao TCM_019445 I 0.858
Thhalv10008699m.g Eutrema salsugineum Thhalv10008699m.g I 0.891
TRAES3BF069400030CFD_g Triticum aestivum TRAES3BF069400030CFD_g I 0.855
TRIUR3_06081 Triticum urartu TRIUR3_06081 I 0.855
VIT_01s0011g03720 Vitis vinifera VIT_01s0011g03720 I 0.891
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I 0.848