Bostr.17775s0015 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.17775s0015 T049085_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BIM3
M01711_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8591 		0.890 0.962
BIM3
M06741_2.00 		Arabidopsis thaliana
DYGTSHNNVKCACGTGMY
RKCACGTGMBNNDSACRH		 Dap-seq
OMalley et al.(2016)
BIM3_col_a 		0.890 0.962
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.17775s0015.1.p bHLH 34 86

Links

Other bHLH family TFs
Other Boechera stricta TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10006445m.g Capsella rubella Carubv10006445m.g I 0.890
BIM3 Arabidopsis thaliana AT5G38860 D 0.890
Cagra.2539s0002 Capsella grandiflora Cagra.2539s0002 I 0.890
BIM3 Arabidopsis lyrata scaffold_704174.1 I 0.890
Lus10034358.g Linum usitatissimum Lus10034358.g I 0.861