CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10010503.g
(
Linum usitatissimum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Lus10010503.g
T050174_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10010503
bHLH
1
50
MSHIAVERNRRRQMNENLTVLRSLTPRIYIKRGDQASIIGGVIEFIKELH
Links
Other
bHLH
family TFs
Other
Linum usitatissimum
TFs
169 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10034031.g
Linum usitatissimum
Lus10034031.g
N
0.914
Solyc01g080050.2
Solanum lycopersicum
Solyc01g080050.2
N
0.884
Cucsa.254010
Cucumis sativus
Cucsa.254010
N
0.881
Ciclev10005947m.g
Citrus clementina
Ciclev10005947m.g
N
0.881
GLYMA15G11130
Glycine max
GLYMA15G11130
N
0.881
GLYMA13G27880
Glycine max
GLYMA13G27880
N
0.881
cassava3377.m1
Manihot esculenta
cassava3377.m1
N
0.881
Ca_00615
Cicer arietinum
Ca_00615
N
0.881
POPTR_0008s20720
Populus trichocarpa
POPTR_0008s20720
N
0.881
TCM_020520
Theobroma cacao
TCM_020520
N
0.881
MTR_2g022280
Medicago truncatula
MTR_2g022280
N
0.881
29844.m003312
Ricinus communis
29844.m003312
N
0.881
MUTE
Vitis vinifera
VIT_05s0020g02700
N
0.881
SapurV1A.0022s0230
Salix purpurea
SapurV1A.0022s0230
N
0.881
chr6.CM0139.250.nd
Lotus japonicus
chr6.CM0139.250.nd
N
0.881
cassava11522.m1
Manihot esculenta
cassava11522.m1
N
0.870
BRADI1G18400
Brachypodium distachyon
BRADI1G18400
N
0.870
MLOC_57631
Hordeum vulgare
MLOC_57631
N
0.868
Pm008014
Prunus mume
Pm008014
N
0.857
Si004438m.g
Setaria italica
Si004438m.g
N
0.857
Cagra.1772s0035
Capsella grandiflora
Cagra.1772s0035
N
0.857
LPERR05G23890
Leersia perrieri
LPERR05G23890
N
0.857
GSMUA_Achr7G21190_001
Musa acuminata
GSMUA_Achr7G21190_001
N
0.857
PRUPE_ppa019299mg
Prunus persica
PRUPE_ppa019299mg
N
0.857
Sb09g030930
Sorghum bicolor
Sb09g030930
N
0.857
MUTE
Arabidopsis lyrata
scaffold_300691.1
N
0.857
OB05G35750
Oryza brachyantha
OB05G35750
N
0.857
Thhalv10022251m.g
Eutrema salsugineum
Thhalv10022251m.g
N
0.857
Carubv10012751m.g
Capsella rubella
Carubv10012751m.g
N
0.857
MUTE
Arabidopsis thaliana
AT3G06120
N
0.857
GSMUA_Achr7G21110_001
Musa acuminata
GSMUA_Achr7G21110_001
N
0.857
MDP0000318772
Malus domestica
MDP0000318772
N
0.857
MDP0000205030
Malus domestica
MDP0000205030
N
0.857
Pavir.Ea00071
Panicum virgatum
Pavir.Ea00071
N
0.857
GRMZM2G417164
Zea mays
GRMZM2G417164
N
0.857
gene06093-v1.0-hybrid
Fragaria vesca
gene06093-v1.0-hybrid
N
0.857
Gorai.006G054300
Gossypium raimondii
Gorai.006G054300
N
0.857
Eucgr.H03591
Eucalyptus grandis
Eucgr.H03591
N
0.857
SELMODRAFT_451148
Selaginella moellendorffii
SELMODRAFT_451148
N
0.855
Sb04g027280
Sorghum bicolor
Sb04g027280
N
0.855
Sb01g044640
Sorghum bicolor
Sb01g044640
N
0.855
Sb04g031250
Sorghum bicolor
Sb04g031250
N
0.855
ORGLA03G0062600
Oryza glaberrima
ORGLA03G0062600
N
0.855
ORGLA05G0238800
Oryza glaberrima
ORGLA05G0238800
N
0.855
Sb09g030060
Sorghum bicolor
Sb09g030060
N
0.855
ORGLA04G0200200
Oryza glaberrima
ORGLA04G0200200
N
0.855
SELMODRAFT_410402
Selaginella moellendorffii
SELMODRAFT_410402
N
0.855
ORUFI02G30170
Oryza rufipogon
ORUFI02G30170
N
0.855
OS02G0691500
Oryza sativa
OS02G0691500
N
0.855
ORUFI04G25160
Oryza rufipogon
ORUFI04G25160
N
0.855
ORUFI10G08570
Oryza rufipogon
ORUFI10G08570
N
0.855
ORUFI05G29450
Oryza rufipogon
ORUFI05G29450
N
0.855
OS03G0188400
Oryza sativa
OS03G0188400
N
0.855
OS05G0586300
Oryza sativa
OS05G0586300
N
0.855
ORGLA10G0067600
Oryza glaberrima
ORGLA10G0067600
N
0.855
ORUFI02G34810
Oryza rufipogon
ORUFI02G34810
N
0.855
OS10G0376900
Oryza sativa
OS10G0376900
N
0.855
ORUFI03G06370
Oryza rufipogon
ORUFI03G06370
N
0.855
Sb0012s004780
Sorghum bicolor
Sb0012s004780
N
0.855
Traes_4BL_A48C29364
Triticum aestivum
Traes_4BL_A48C29364
N
0.855
Pavir.Ia04907
Panicum virgatum
Pavir.Ia04907
N
0.855
Gorai.007G294800
Gossypium raimondii
Gorai.007G294800
N
0.855
Pavir.Ib02778
Panicum virgatum
Pavir.Ib02778
N
0.855
Pavir.J03740
Panicum virgatum
Pavir.J03740
N
0.855
Pavir.J04021
Panicum virgatum
Pavir.J04021
N
0.855
Lus10010101.g
Linum usitatissimum
Lus10010101.g
N
0.855
Pavir.Ia03109
Panicum virgatum
Pavir.Ia03109
N
0.855
Pavir.Ab02502
Panicum virgatum
Pavir.Ab02502
N
0.855
Pavir.Aa00538
Panicum virgatum
Pavir.Aa00538
N
0.855
Lus10012603.g
Linum usitatissimum
Lus10012603.g
N
0.855
Pavir.Ia02758
Panicum virgatum
Pavir.Ia02758
N
0.855
Pavir.J40759
Panicum virgatum
Pavir.J40759
N
0.855
VIT_07s0191g00240
Vitis vinifera
VIT_07s0191g00240
N
0.855
Si038653m.g
Setaria italica
Si038653m.g
N
0.855
Traes_2BL_E58521BDF
Triticum aestivum
Traes_2BL_E58521BDF
N
0.855
Si036568m.g
Setaria italica
Si036568m.g
N
0.855
Si021834m.g
Setaria italica
Si021834m.g
N
0.855
Si017715m.g
Setaria italica
Si017715m.g
N
0.855
Traes_4AL_EE88645E2
Triticum aestivum
Traes_4AL_EE88645E2
N
0.855
Pavir.Db01842
Panicum virgatum
Pavir.Db01842
N
0.855
ORGLA02G0287300
Oryza glaberrima
ORGLA02G0287300
N
0.855
bHLH071
Vitis vinifera
VIT_02s0012g01450
N
0.855
Traes_6DL_882BC1812
Triticum aestivum
Traes_6DL_882BC1812
N
0.855
Traes_4DL_A76BE77E4
Triticum aestivum
Traes_4DL_A76BE77E4
N
0.855
Si017701m.g
Setaria italica
Si017701m.g
N
0.855
ORGLA02G0246400
Oryza glaberrima
ORGLA02G0246400
N
0.855
LPERR02G23260
Leersia perrieri
LPERR02G23260
N
0.855
LPERR03G05820
Leersia perrieri
LPERR03G05820
N
0.855
LPERR04G19210
Leersia perrieri
LPERR04G19210
N
0.855
GSMUA_Achr8G28400_001
Musa acuminata
GSMUA_Achr8G28400_001
N
0.855
GSMUA_Achr6G10290_001
Musa acuminata
GSMUA_Achr6G10290_001
N
0.855
GSMUA_Achr2G06030_001
Musa acuminata
GSMUA_Achr2G06030_001
N
0.855
GSMUA_Achr2G22310_001
Musa acuminata
GSMUA_Achr2G22310_001
N
0.855
MLOC_10595
Hordeum vulgare
MLOC_10595
N
0.855
AC233899.1_FG002
Zea mays
AC233899.1_FG002
N
0.855
OB03G16590
Oryza brachyantha
OB03G16590
N
0.855
OB04G30380
Oryza brachyantha
OB04G30380
N
0.855
OB02G40170
Oryza brachyantha
OB02G40170
N
0.855
OB02G35790
Oryza brachyantha
OB02G35790
N
0.855
MLOC_67091
Hordeum vulgare
MLOC_67091
N
0.855
MLOC_67417
Hordeum vulgare
MLOC_67417
N
0.855
GSMUA_Achr11G23340_001
Musa acuminata
GSMUA_Achr11G23340_001
N
0.855
GSMUA_Achr11G00350_001
Musa acuminata
GSMUA_Achr11G00350_001
N
0.855
BGIOSGA017471
Oryza indica
BGIOSGA017471
N
0.855
BGIOSGA032814
Oryza indica
BGIOSGA032814
N
0.855
BGIOSGA017025
Oryza indica
BGIOSGA017025
N
0.855
BGIOSGA012015
Oryza indica
BGIOSGA012015
N
0.855
BGIOSGA005582
Oryza indica
BGIOSGA005582
N
0.855
BGIOSGA008846
Oryza indica
BGIOSGA008846
N
0.855
BRADI3G52150
Brachypodium distachyon
BRADI3G52150
N
0.855
BRADI5G19950
Brachypodium distachyon
BRADI5G19950
N
0.855
GRMZM2G111146
Zea mays
GRMZM2G111146
N
0.855
GRMZM2G162450
Zea mays
GRMZM2G162450
N
0.855
GRMZM2G091003
Zea mays
GRMZM2G091003
N
0.855
GRMZM2G045883
Zea mays
GRMZM2G045883
N
0.855
F775_11253
Aegilops tauschii
F775_11253
N
0.855
GRMZM2G008691
Zea mays
GRMZM2G008691
N
0.855
OB05G34990
Oryza brachyantha
OB05G34990
N
0.855
MLOC_45114
Hordeum vulgare
MLOC_45114
N
0.855
ONIVA02G06380
Oryza nivara
ONIVA02G06380
N
0.855
ONIVA02G35790
Oryza nivara
ONIVA02G35790
N
0.855
ONIVA04G03690
Oryza nivara
ONIVA04G03690
N
0.855
OB10G16200
Oryza brachyantha
OB10G16200
N
0.855
OMERI03G06350
Oryza meridionalis
OMERI03G06350
N
0.855
OMERI02G31750
Oryza meridionalis
OMERI02G31750
N
0.855
OMERI03G01350
Oryza meridionalis
OMERI03G01350
N
0.855
ONIVA04G22720
Oryza nivara
ONIVA04G22720
N
0.855
ONIVA05G29540
Oryza nivara
ONIVA05G29540
N
0.855
OPUNC04G21010
Oryza punctata
OPUNC04G21010
N
0.855
OPUNC05G25080
Oryza punctata
OPUNC05G25080
N
0.855
OPUNC10G07050
Oryza punctata
OPUNC10G07050
N
0.855
OPUNC03G06240
Oryza punctata
OPUNC03G06240
N
0.855
OPUNC02G30580
Oryza punctata
OPUNC02G30580
N
0.855
ONIVA10G07810
Oryza nivara
ONIVA10G07810
N
0.855
OPUNC02G26270
Oryza punctata
OPUNC02G26270
N
0.855
OLONG_028191
Oryza longistaminata
OLONG_028191
N
0.855
OMERI05G23490
Oryza meridionalis
OMERI05G23490
N
0.855
OBART04G23490
Oryza barthii
OBART04G23490
N
0.855
OBART03G06470
Oryza barthii
OBART03G06470
N
0.855
OGLUM03G06480
Oryza glumaepatula
OGLUM03G06480
N
0.855
OGLUM02G33770
Oryza glumaepatula
OGLUM02G33770
N
0.855
OBART05G27490
Oryza barthii
OBART05G27490
N
0.855
OGLUM04G23410
Oryza glumaepatula
OGLUM04G23410
N
0.855
OGLUM05G29000
Oryza glumaepatula
OGLUM05G29000
N
0.855
OBART02G28630
Oryza barthii
OBART02G28630
N
0.855
OLONG_001045
Oryza longistaminata
OLONG_001045
N
0.855
OGLUM10G07850
Oryza glumaepatula
OGLUM10G07850
N
0.855
OBART02G33270
Oryza barthii
OBART02G33270
N
0.855
OBART10G08120
Oryza barthii
OBART10G08120
N
0.855
Si007984m.g
Setaria italica
Si007984m.g
N
0.854
F775_02125
Aegilops tauschii
F775_02125
N
0.848
Traes_2BS_EE97B0B15
Triticum aestivum
Traes_2BS_EE97B0B15
N
0.848
Bra001183
Brassica rapa
Bra001183
N
0.846
Bo3g060420
Brassica oleracea
Bo3g060420
N
0.846
Carubv10018614m.g
Capsella rubella
Carubv10018614m.g
N
0.843
Bra007644
Brassica rapa
Bra007644
N
0.843
Ca_13080
Cicer arietinum
Ca_13080
N
0.843
Bostr.13158s0200
Boechera stricta
Bostr.13158s0200
N
0.843
Bo8g097470
Brassica oleracea
Bo8g097470
N
0.843
BHLH67
Arabidopsis thaliana
AT3G61950
N
0.843
Cagra.0483s0048
Capsella grandiflora
Cagra.0483s0048
N
0.843
Thhalv10006045m.g
Eutrema salsugineum
Thhalv10006045m.g
N
0.843
fgenesh2_kg.5__2692__AT3G61950.1
Arabidopsis lyrata
fgenesh2_kg.5__2692__AT3G61950.1
N
0.843
GRMZM2G086474
Zea mays
GRMZM2G086474
N
0.842
Bra027958
Brassica rapa
Bra027958
N
0.842
Pavir.Ga00771
Panicum virgatum
Pavir.Ga00771
N
0.842
Bo9g055890
Brassica oleracea
Bo9g055890
N
0.842
Si010485m.g
Setaria italica
Si010485m.g
N
0.842
Pavir.J15346
Panicum virgatum
Pavir.J15346
N
0.842