Pavir.Ea00071 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ea00071 T050735_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea00071.1.p bHLH 1 50

Links

Other bHLH family TFs
Other Panicum virgatum TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR05G23890 Leersia perrieri LPERR05G23890 N 0.914
Si004438m.g Setaria italica Si004438m.g N 0.914
OB05G35750 Oryza brachyantha OB05G35750 N 0.914
OBART05G28280 Oryza barthii OBART05G28280 N 0.894
BGIOSGA020491 Oryza indica BGIOSGA020491 N 0.894
ORUFI05G30290 Oryza rufipogon ORUFI05G30290 N 0.894
Pavir.Fb01393 Panicum virgatum Pavir.Fb01393 N 0.894
ORGLA05G0246000 Oryza glaberrima ORGLA05G0246000 N 0.894
OS05G0597000 Oryza sativa OS05G0597000 N 0.894
OGLUM05G29710 Oryza glumaepatula OGLUM05G29710 N 0.894
ONIVA05G30250 Oryza nivara ONIVA05G30250 N 0.894
OPUNC05G25820 Oryza punctata OPUNC05G25820 N 0.894
Pavir.J25730 Panicum virgatum Pavir.J25730 N 0.894
OLONG_006958 Oryza longistaminata OLONG_006958 N 0.894
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N 0.888
LPERR03G05820 Leersia perrieri LPERR03G05820 N 0.885
OS03G0188400 Oryza sativa OS03G0188400 N 0.885
MLOC_67417 Hordeum vulgare MLOC_67417 N 0.885
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N 0.885
OMERI03G06350 Oryza meridionalis OMERI03G06350 N 0.885
ONIVA02G06380 Oryza nivara ONIVA02G06380 N 0.885
OLONG_001045 Oryza longistaminata OLONG_001045 N 0.885
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N 0.885
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N 0.885
OBART03G06470 Oryza barthii OBART03G06470 N 0.885
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N 0.885
BGIOSGA012015 Oryza indica BGIOSGA012015 N 0.885
GSMUA_Achr7G21190_001 Musa acuminata GSMUA_Achr7G21190_001 N 0.884
Thhalv10022251m.g Eutrema salsugineum Thhalv10022251m.g N 0.884
GSMUA_Achr7G21110_001 Musa acuminata GSMUA_Achr7G21110_001 N 0.884
GRMZM2G417164 Zea mays GRMZM2G417164 N 0.884
MUTE Arabidopsis lyrata scaffold_300691.1 N 0.884
Sb09g030930 Sorghum bicolor Sb09g030930 N 0.884
Eucgr.H03591 Eucalyptus grandis Eucgr.H03591 N 0.884
Gorai.006G054300 Gossypium raimondii Gorai.006G054300 N 0.884
Carubv10012751m.g Capsella rubella Carubv10012751m.g N 0.884
Cagra.1772s0035 Capsella grandiflora Cagra.1772s0035 N 0.884
MUTE Arabidopsis thaliana AT3G06120 N 0.884
SELMODRAFT_410402 Selaginella moellendorffii SELMODRAFT_410402 N 0.882
SELMODRAFT_451148 Selaginella moellendorffii SELMODRAFT_451148 N 0.882
BRADI1G18400 Brachypodium distachyon BRADI1G18400 N 0.879
MLOC_57631 Hordeum vulgare MLOC_57631 N 0.877
Bra001183 Brassica rapa Bra001183 N 0.873
Bo3g060420 Brassica oleracea Bo3g060420 N 0.873
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.864
Si013925m.g Setaria italica Si013925m.g N 0.861
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.861
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.861
29844.m003312 Ricinus communis 29844.m003312 N 0.860
MUTE Vitis vinifera VIT_05s0020g02700 N 0.860
Cucsa.254010 Cucumis sativus Cucsa.254010 N 0.860
cassava3377.m1 Manihot esculenta cassava3377.m1 N 0.860
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.860
chr6.CM0139.250.nd Lotus japonicus chr6.CM0139.250.nd N 0.860
MTR_2g022280 Medicago truncatula MTR_2g022280 N 0.860
TCM_020520 Theobroma cacao TCM_020520 N 0.860
GLYMA13G27880 Glycine max GLYMA13G27880 N 0.860
Ciclev10005947m.g Citrus clementina Ciclev10005947m.g N 0.860
SapurV1A.0022s0230 Salix purpurea SapurV1A.0022s0230 N 0.860
Ca_00615 Cicer arietinum Ca_00615 N 0.860
POPTR_0008s20720 Populus trichocarpa POPTR_0008s20720 N 0.860
GLYMA15G11130 Glycine max GLYMA15G11130 N 0.860
Bostr.2570s0048 Boechera stricta Bostr.2570s0048 N 0.860
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.858
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.858
mgf011108m Mimulus guttatus mgf011108m N 0.858
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.858
bHLH071 Vitis vinifera VIT_02s0012g01450 N 0.858
GSMUA_Achr11G00350_001 Musa acuminata GSMUA_Achr11G00350_001 N 0.858
GSMUA_Achr11G23340_001 Musa acuminata GSMUA_Achr11G23340_001 N 0.858
GSMUA_Achr2G06030_001 Musa acuminata GSMUA_Achr2G06030_001 N 0.858
GSMUA_Achr8G28400_001 Musa acuminata GSMUA_Achr8G28400_001 N 0.858
evm.TU.supercontig_55.64 Carica papaya evm.TU.supercontig_55.64 N 0.857
Solyc01g080050.2 Solanum lycopersicum Solyc01g080050.2 N 0.857
Traes_2BS_EE97B0B15 Triticum aestivum Traes_2BS_EE97B0B15 N 0.857
Lus10010503.g Linum usitatissimum Lus10010503.g N 0.857
F775_02125 Aegilops tauschii F775_02125 N 0.857
Lus10034031.g Linum usitatissimum Lus10034031.g N 0.857
Pavir.Ab02502 Panicum virgatum Pavir.Ab02502 N 0.855
ORGLA02G0246400 Oryza glaberrima ORGLA02G0246400 N 0.855
OPUNC04G21010 Oryza punctata OPUNC04G21010 N 0.855
Pavir.J04021 Panicum virgatum Pavir.J04021 N 0.855
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.855
ORUFI02G30170 Oryza rufipogon ORUFI02G30170 N 0.855
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.855
OPUNC05G25080 Oryza punctata OPUNC05G25080 N 0.855
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.855
ORGLA05G0238800 Oryza glaberrima ORGLA05G0238800 N 0.855
OPUNC02G26270 Oryza punctata OPUNC02G26270 N 0.855
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.855
Gorai.007G294800 Gossypium raimondii Gorai.007G294800 N 0.855
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.855
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.855
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.855
ORGLA04G0200200 Oryza glaberrima ORGLA04G0200200 N 0.855
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.855
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.855
Si021834m.g Setaria italica Si021834m.g N 0.855
Si036568m.g Setaria italica Si036568m.g N 0.855
Si017715m.g Setaria italica Si017715m.g N 0.855
Si017701m.g Setaria italica Si017701m.g N 0.855
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.855
Si038653m.g Setaria italica Si038653m.g N 0.855
Traes_2BL_E58521BDF Triticum aestivum Traes_2BL_E58521BDF N 0.855
Traes_6DL_882BC1812 Triticum aestivum Traes_6DL_882BC1812 N 0.855
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.855
Traes_4DL_A76BE77E4 Triticum aestivum Traes_4DL_A76BE77E4 N 0.855
Traes_4BL_A48C29364 Triticum aestivum Traes_4BL_A48C29364 N 0.855
Traes_4AL_EE88645E2 Triticum aestivum Traes_4AL_EE88645E2 N 0.855
Sb09g030060 Sorghum bicolor Sb09g030060 N 0.855
Sb04g031250 Sorghum bicolor Sb04g031250 N 0.855
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.855
OS02G0691500 Oryza sativa OS02G0691500 N 0.855
Pavir.J03740 Panicum virgatum Pavir.J03740 N 0.855
ORUFI05G29450 Oryza rufipogon ORUFI05G29450 N 0.855
ORUFI04G25160 Oryza rufipogon ORUFI04G25160 N 0.855
OS05G0586300 Oryza sativa OS05G0586300 N 0.855
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.855
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.855
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.855
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.855
OS10G0376900 Oryza sativa OS10G0376900 N 0.855
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.855
ONIVA04G22720 Oryza nivara ONIVA04G22720 N 0.855
BGIOSGA017025 Oryza indica BGIOSGA017025 N 0.855
OB02G35790 Oryza brachyantha OB02G35790 N 0.855
BGIOSGA017471 Oryza indica BGIOSGA017471 N 0.855
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.855
MLOC_45114 Hordeum vulgare MLOC_45114 N 0.855
OB02G40170 Oryza brachyantha OB02G40170 N 0.855
OB03G16590 Oryza brachyantha OB03G16590 N 0.855
OB10G16200 Oryza brachyantha OB10G16200 N 0.855
OB05G34990 Oryza brachyantha OB05G34990 N 0.855
BGIOSGA008846 Oryza indica BGIOSGA008846 N 0.855
OB04G30380 Oryza brachyantha OB04G30380 N 0.855
MLOC_10595 Hordeum vulgare MLOC_10595 N 0.855
LPERR04G19210 Leersia perrieri LPERR04G19210 N 0.855
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.855
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.855
F775_11253 Aegilops tauschii F775_11253 N 0.855
BRADI5G19950 Brachypodium distachyon BRADI5G19950 N 0.855
BRADI3G52150 Brachypodium distachyon BRADI3G52150 N 0.855
ONIVA05G29540 Oryza nivara ONIVA05G29540 N 0.855
GRMZM2G091003 Zea mays GRMZM2G091003 N 0.855
LPERR02G23260 Leersia perrieri LPERR02G23260 N 0.855
GSMUA_Achr2G22310_001 Musa acuminata GSMUA_Achr2G22310_001 N 0.855
GRMZM2G162450 Zea mays GRMZM2G162450 N 0.855
GRMZM2G111146 Zea mays GRMZM2G111146 N 0.855
OBART02G28630 Oryza barthii OBART02G28630 N 0.855
MLOC_67091 Hordeum vulgare MLOC_67091 N 0.855
OGLUM04G23410 Oryza glumaepatula OGLUM04G23410 N 0.855
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.855
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.855
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.855
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.855
OMERI05G23490 Oryza meridionalis OMERI05G23490 N 0.855
OGLUM05G29000 Oryza glumaepatula OGLUM05G29000 N 0.855
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.855
ONIVA04G03690 Oryza nivara ONIVA04G03690 N 0.855
OBART04G23490 Oryza barthii OBART04G23490 N 0.855
OBART02G33270 Oryza barthii OBART02G33270 N 0.855
OBART05G27490 Oryza barthii OBART05G27490 N 0.855
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.855
OBART10G08120 Oryza barthii OBART10G08120 N 0.855
OLONG_028191 Oryza longistaminata OLONG_028191 N 0.855
OMERI03G01350 Oryza meridionalis OMERI03G01350 N 0.855
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.854
Bo6g114730 Brassica oleracea Bo6g114730 N 0.854
Si007984m.g Setaria italica Si007984m.g N 0.854
Bra040234 Brassica rapa Bra040234 N 0.852
Bo5g144750 Brassica oleracea Bo5g144750 N 0.852
Bra020775 Brassica rapa Bra020775 N 0.852
Bo1g150080 Brassica oleracea Bo1g150080 N 0.852
cassava11522.m1 Manihot esculenta cassava11522.m1 N 0.849
Aquca_010_00112 Aquilegia coerulea Aquca_010_00112 N 0.848
Bra007644 Brassica rapa Bra007644 N 0.846
Pavir.Ab01030 Panicum virgatum Pavir.Ab01030 N 0.846
SPCH Arabidopsis thaliana AT5G53210 N 0.846
mgf014552m Mimulus guttatus mgf014552m N 0.846
SPCH Arabidopsis lyrata Al_scaffold_0008_1712 N 0.846
Bo8g097470 Brassica oleracea Bo8g097470 N 0.846
Bo9g110960 Brassica oleracea Bo9g110960 N 0.846
Bra003073 Brassica rapa Bra003073 N 0.846
cassava32469.m1 Manihot esculenta cassava32469.m1 N 0.846
Lus10014938.g Linum usitatissimum Lus10014938.g N 0.846
cassava7222.valid.m1 Manihot esculenta cassava7222.valid.m1 N 0.846
Gorai.008G270700 Gossypium raimondii Gorai.008G270700 N 0.846
30169.m006534 Ricinus communis 30169.m006534 N 0.846
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.846
BGIOSGA006748 Oryza indica BGIOSGA006748 N 0.846
Pavir.Db01402 Panicum virgatum Pavir.Db01402 N 0.846
AMTR_s00015p00239460 Amborella trichopoda AMTR_s00015p00239460 N 0.846
Bo3g022850 Brassica oleracea Bo3g022850 N 0.846
Carubv10026630m.g Capsella rubella Carubv10026630m.g N 0.846
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.846
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.846
Cagra.0084s0068 Capsella grandiflora Cagra.0084s0068 N 0.846
Pavir.Aa02723 Panicum virgatum Pavir.Aa02723 N 0.846
Bo2g046020 Brassica oleracea Bo2g046020 N 0.846
PDK_20s1314901g001 Phoenix dactylifera PDK_20s1314901g001 N 0.846
Bostr.26833s0957 Boechera stricta Bostr.26833s0957 N 0.846
Eucgr.A02667 Eucalyptus grandis Eucgr.A02667 N 0.846
BHLH67 Arabidopsis thaliana AT3G61950 N 0.846
Aquca_037_00084 Aquilegia coerulea Aquca_037_00084 N 0.846
Thhalv10013877m.g Eutrema salsugineum Thhalv10013877m.g N 0.846
POPTR_0012s01370 Populus trichocarpa POPTR_0012s01370 N 0.846
MTR_3g090850 Medicago truncatula MTR_3g090850 N 0.846
OB02G19900 Oryza brachyantha OB02G19900 N 0.846
POPTR_0015s06160 Populus trichocarpa POPTR_0015s06160 N 0.846
MLOC_54435 Hordeum vulgare MLOC_54435 N 0.846
Sb10g020490 Sorghum bicolor Sb10g020490 N 0.846
SapurV1A.1227s0030 Salix purpurea SapurV1A.1227s0030 N 0.846
Sb04g009390 Sorghum bicolor Sb04g009390 N 0.846
OS02G0257500 Oryza sativa OS02G0257500 N 0.846
OBART02G11110 Oryza barthii OBART02G11110 N 0.846
ONIVA02G12460 Oryza nivara ONIVA02G12460 N 0.846
OPUNC02G09860 Oryza punctata OPUNC02G09860 N 0.846
Pavir.Da00918 Panicum virgatum Pavir.Da00918 N 0.846
OMERI02G11850 Oryza meridionalis OMERI02G11850 N 0.846
ORGLA02G0100500 Oryza glaberrima ORGLA02G0100500 N 0.846
ORUFI02G11080 Oryza rufipogon ORUFI02G11080 N 0.846
OGLUM02G11060 Oryza glumaepatula OGLUM02G11060 N 0.846
Ca_03951 Cicer arietinum Ca_03951 N 0.846
LPERR02G09400 Leersia perrieri LPERR02G09400 N 0.846
Traes_7DL_1717A9083 Triticum aestivum Traes_7DL_1717A9083 N 0.846
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.846
GLYMA04G41710 Glycine max GLYMA04G41710 N 0.846
BRADI1G38650 Brachypodium distachyon BRADI1G38650 N 0.846
Bra029088 Brassica rapa Bra029088 N 0.846
Bra022638 Brassica rapa Bra022638 N 0.846
SPCH Vitis vinifera VIT_16s0050g02500 N 0.846
GSMUA_Achr8G19870_001 Musa acuminata GSMUA_Achr8G19870_001 N 0.846
GLYMA06G13081 Glycine max GLYMA06G13081 N 0.846
TCM_015345 Theobroma cacao TCM_015345 N 0.846
Si017482m.g Setaria italica Si017482m.g N 0.846
GSMUA_Achr10G01060_001 Musa acuminata GSMUA_Achr10G01060_001 N 0.846
GRMZM2G085751 Zea mays GRMZM2G085751 N 0.846
GRMZM2G064638 Zea mays GRMZM2G064638 N 0.846
Solyc03g007410.2 Solanum lycopersicum Solyc03g007410.2 N 0.846
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.846
Si006640m.g Setaria italica Si006640m.g N 0.846
SapurV1A.0377s0010 Salix purpurea SapurV1A.0377s0010 N 0.843
SapurV1A.1043s0040 Salix purpurea SapurV1A.1043s0040 N 0.843
PK01904.1 Cannabis sativa PK01904.1 N 0.843
OPUNC06G15310 Oryza punctata OPUNC06G15310 N 0.843
OLONG_015104 Oryza longistaminata OLONG_015104 N 0.843
OMERI06G17780 Oryza meridionalis OMERI06G17780 N 0.843
orange1.1g042904m.g Citrus sinensis orange1.1g042904m.g N 0.843
OGLUM06G17990 Oryza glumaepatula OGLUM06G17990 N 0.843
OBART06G16920 Oryza barthii OBART06G16920 N 0.843
BGIOSGA023024 Oryza indica BGIOSGA023024 N 0.843
BRADI3G09670 Brachypodium distachyon BRADI3G09670 N 0.843
LPERR06G13950 Leersia perrieri LPERR06G13950 N 0.843
ORGLA06G0140300 Oryza glaberrima ORGLA06G0140300 N 0.843
ONIVA06G19730 Oryza nivara ONIVA06G19730 N 0.843
Ciclev10007150m.g Citrus clementina Ciclev10007150m.g N 0.843
OS06G0526100 Oryza sativa OS06G0526100 N 0.843
ORUFI06G17910 Oryza rufipogon ORUFI06G17910 N 0.843
Bra027958 Brassica rapa Bra027958 N 0.842
Bo9g055890 Brassica oleracea Bo9g055890 N 0.842
GRMZM2G086474 Zea mays GRMZM2G086474 N 0.842
Pavir.Ga00771 Panicum virgatum Pavir.Ga00771 N 0.842
Si010485m.g Setaria italica Si010485m.g N 0.842
Pavir.J15346 Panicum virgatum Pavir.J15346 N 0.842
PRUPE_ppa020862mg Prunus persica PRUPE_ppa020862mg N 0.840
MDP0000229007 Malus domestica MDP0000229007 N 0.840
Pm002111 Prunus mume Pm002111 N 0.840
GSMUA_Achr5G17900_001 Musa acuminata GSMUA_Achr5G17900_001 N 0.840