MDP0000133262 (Malus domestica)

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000133262 T050319_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Arabidopsis thaliana Transfac license required
Transfac license required
Matys et al.(2006)
0.840 0.633
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000133262 bHLH 31 79


Other bHLH family TFs
Other Malus domestica TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
30147.m014419 Ricinus communis 30147.m014419 I 0.840
30198.m000869 Ricinus communis 30198.m000869 I 0.914
AMS Populus trichocarpa POPTR_0009s13860 I 0.857
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.840
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.840
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.914
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.840
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.840
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.846
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.840
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.867
BGIOSGA015389 Oryza indica BGIOSGA015389 N 0.846
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.840
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.863
Bo00285s440 Brassica oleracea Bo00285s440 I 0.840
Bo3g019430 Brassica oleracea Bo3g019430 N 0.846
Bo5g016510 Brassica oleracea Bo5g016510 I 0.840
Bo7g083870 Brassica oleracea Bo7g083870 I 0.840
Bo8g065080 Brassica oleracea Bo8g065080 I 0.840
Bo9g008020 Brassica oleracea Bo9g008020 I 0.840
Bo9g130890 Brassica oleracea Bo9g130890 N 0.846
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.840
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.840
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.846
Bra002756 Brassica rapa Bra002756 N 0.846
Bra006831 Brassica rapa Bra006831 N 0.846
Bra016749 Brassica rapa Bra016749 I 0.840
Bra019794 Brassica rapa Bra019794 I 0.840
Bra020462 Brassica rapa Bra020462 N 0.846
Bra025226 Brassica rapa Bra025226 I 0.840
Bra032947 Brassica rapa Bra032947 I 0.840
Bra034246 Brassica rapa Bra034246 I 0.840
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.840
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.843
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.870
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.840
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.863
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.870
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.846
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.840
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.870
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.840
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.840
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.881
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.881
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.914
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.840
Ca_01394 Cicer arietinum Ca_01394 I 0.840 Lotus japonicus I 0.840
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.914
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.840
Cla002682 Citrullus lanatus Cla002682 I 0.840
Cla003283 Citrullus lanatus Cla003283 I 0.840
Cla010249 Citrullus lanatus Cla010249 N 0.845
Cla016068 Citrullus lanatus Cla016068 I 0.860
Cla019147 Citrullus lanatus Cla019147 N 0.890
Cla023112 Citrullus lanatus Cla023112 I 0.870
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.860
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.870
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.840
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.840
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.890
Cucsa.286080 Cucumis sativus Cucsa.286080 N 0.845
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.860
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.840
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.840
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.857
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.914
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.840
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.840
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N 0.870
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.840
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.860
F775_14780 Aegilops tauschii F775_14780 I 0.840
F775_15875 Aegilops tauschii F775_15875 I 0.840
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.857
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.846
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.840
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.914
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.887
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.857
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.840
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.870
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.840
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.914
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.894
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.914
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.840
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.867
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.894
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.840
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.840
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.840
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.840
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I 0.847
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.870
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.914
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.840
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.866
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.863
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.843
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.864
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.840
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.840
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.840
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.840
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.887
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.840
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.840
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.840
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.850
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.887
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.840
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.840
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.840
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.863
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.840
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.914
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.840
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.840
MDP0000243628 Malus domestica MDP0000243628 I 0.858
MDP0000247912 Malus domestica MDP0000247912 I 0.840
MDP0000304669 Malus domestica MDP0000304669 I 0.840
MDP0000318229 Malus domestica MDP0000318229 I 0.914
MDP0000662999 Malus domestica MDP0000662999 I 0.840
mgf012194m Mimulus guttatus mgf012194m I 0.840
mgf015974m Mimulus guttatus mgf015974m I 0.840
mgf016462m Mimulus guttatus mgf016462m I 0.840
mgf018455m Mimulus guttatus mgf018455m I 0.857
mgf019723m Mimulus guttatus mgf019723m I 0.887
mgf024029m Mimulus guttatus mgf024029m I 0.870
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.840
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.870
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.863
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.840
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.914
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.840
OBART01G42600 Oryza barthii OBART01G42600 I 0.840
OBART02G01550 Oryza barthii OBART02G01550 I 0.867
OBART11G15260 Oryza barthii OBART11G15260 I 0.840
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.840
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.867
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.840
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.840
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.867
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.863
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.840
ONIVA01G07150 Oryza nivara ONIVA01G07150 N 0.846
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.863
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.840
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.867
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.840
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.840
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.867
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.863
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.840
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.840
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.914
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.840
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.840
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.867
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.840
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.840
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.867
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.863
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.840
OS01G0928000 Oryza sativa OS01G0928000 I 0.840
OS04G0301500 Oryza sativa OS04G0301500 N 0.863
OS11G0523700 Oryza sativa OS11G0523700 I 0.840
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.870
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.840
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.840
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.862
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.863
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.863
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.840
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.840
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.914
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I 0.847
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.840
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.840
PK03241.1 Cannabis sativa PK03241.1 I 0.847
PK06841.1 Cannabis sativa PK06841.1 I 0.864
PK06940.1 Cannabis sativa PK06940.1 I 0.840
Pm008898 Prunus mume Pm008898 I 0.884
Pm016093 Prunus mume Pm016093 I 0.840
Pm020878 Prunus mume Pm020878 N 0.864
Pm020879 Prunus mume Pm020879 I 0.877
Pm024587 Prunus mume Pm024587 I 0.840
POPTR_0006s07440 Populus trichocarpa POPTR_0006s07440 N 0.879
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.840
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.840
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.914
PRUPE_ppa002978mg Prunus persica PRUPE_ppa002978mg I 0.843
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.840
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.884
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.840
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.877
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.855
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.914
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.857
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.840
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.840
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.840
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.840
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.870
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.840
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.863
SCRM Arabidopsis thaliana AT3G26744 D 0.840
SCRM2 Arabidopsis thaliana AT1G12860 I 0.840
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.840
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.840
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.860
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.860
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.860
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.860
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.840
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.840
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.840
Si001874m.g Setaria italica Si001874m.g I 0.840
Si006500m.g Setaria italica Si006500m.g I 0.867
Si010413m.g Setaria italica Si010413m.g N 0.863
Si010812m.g Setaria italica Si010812m.g N 0.863
Si019518m.g Setaria italica Si019518m.g I 0.890
Si026212m.g Setaria italica Si026212m.g I 0.840
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.840
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.840
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.914
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I 0.847
TCM_006602 Theobroma cacao TCM_006602 I 0.847
TCM_014741 Theobroma cacao TCM_014741 I 0.840
TCM_017336 Theobroma cacao TCM_017336 I 0.840
TCM_039471 Theobroma cacao TCM_039471 I 0.914
TDR Oryza sativa OS02G0120500 I 0.867
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.840
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.840
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.846
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.840
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.887
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.863
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.863
Traes_4DS_7B0E8D459 Triticum aestivum Traes_4DS_7B0E8D459 I 0.840
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.870
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.846
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.840
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.840
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.840
TRIUR3_16046 Triticum urartu TRIUR3_16046 I 0.840
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.840
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.840
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.914
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.840
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.840