CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000133262
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000133262
T050319_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.840
0.633
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000133262
bHLH
31
79
ASKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQELH
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
253 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.914
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.914
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.914
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.914
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.914
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.914
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.914
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.914
30198.m000869
Ricinus communis
30198.m000869
I
0.914
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.914
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.914
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.914
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.914
MDP0000318229
Malus domestica
MDP0000318229
I
0.914
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.914
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.914
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.914
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.914
TCM_039471
Theobroma cacao
TCM_039471
I
0.914
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.894
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.894
Si019518m.g
Setaria italica
Si019518m.g
I
0.890
Cla019147
Citrullus lanatus
Cla019147
N
0.890
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
0.890
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.887
mgf019723m
Mimulus guttatus
mgf019723m
I
0.887
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.887
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.887
Traes_2AL_411B944D6
Triticum aestivum
Traes_2AL_411B944D6
N
0.887
PRUPE_ppa010972mg
Prunus persica
PRUPE_ppa010972mg
I
0.884
Pm008898
Prunus mume
Pm008898
I
0.884
cassava2551.valid.m1
Manihot esculenta
cassava2551.valid.m1
I
0.881
cassava2552.valid.m1
Manihot esculenta
cassava2552.valid.m1
I
0.881
POPTR_0006s07440
Populus trichocarpa
POPTR_0006s07440
N
0.879
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.877
Pm020879
Prunus mume
Pm020879
I
0.877
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.870
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.870
evm.TU.supercontig_115.71
Carica papaya
evm.TU.supercontig_115.71
N
0.870
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.870
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.870
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.870
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.870
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.870
Cla023112
Citrullus lanatus
Cla023112
I
0.870
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.870
mgf024029m
Mimulus guttatus
mgf024029m
I
0.870
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.870
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.870
OBART02G01550
Oryza barthii
OBART02G01550
I
0.867
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.867
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.867
TDR
Oryza sativa
OS02G0120500
I
0.867
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.867
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.867
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.867
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.867
Si006500m.g
Setaria italica
Si006500m.g
I
0.867
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.867
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.867
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.866
GRMZM2G139372
Zea mays
GRMZM2G139372
N
0.864
PK06841.1
Cannabis sativa
PK06841.1
I
0.864
Pm020878
Prunus mume
Pm020878
N
0.864
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.863
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.863
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.863
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.863
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.863
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.863
OS04G0301500
Oryza sativa
OS04G0301500
N
0.863
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.863
Si010812m.g
Setaria italica
Si010812m.g
N
0.863
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.863
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.863
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.863
Si010413m.g
Setaria italica
Si010413m.g
N
0.863
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.863
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.863
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.863
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.863
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.862
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.860
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.860
Cla016068
Citrullus lanatus
Cla016068
I
0.860
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.860
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.860
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.860
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.860
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.860
MDP0000243628
Malus domestica
MDP0000243628
I
0.858
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.857
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.857
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.857
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.857
mgf018455m
Mimulus guttatus
mgf018455m
I
0.857
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.857
SapurV1A.0001s2810
Salix purpurea
SapurV1A.0001s2810
N
0.855
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.850
TCM_006602
Theobroma cacao
TCM_006602
I
0.847
PK03241.1
Cannabis sativa
PK03241.1
I
0.847
Gorai.008G036900
Gossypium raimondii
Gorai.008G036900
I
0.847
Solyc08g062780.1
Solanum lycopersicum
Solyc08g062780.1
I
0.847
PGSC0003DMG400008195
Solanum tuberosum
PGSC0003DMG400008195
I
0.847
Bra002756
Brassica rapa
Bra002756
N
0.846
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.846
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.846
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.846
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.846
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.846
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.846
ONIVA01G07150
Oryza nivara
ONIVA01G07150
N
0.846
BGIOSGA015389
Oryza indica
BGIOSGA015389
N
0.846
Bra020462
Brassica rapa
Bra020462
N
0.846
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.846
Bra006831
Brassica rapa
Bra006831
N
0.846
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.846
Cucsa.286080
Cucumis sativus
Cucsa.286080
N
0.845
Cla010249
Citrullus lanatus
Cla010249
N
0.845
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.843
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.843
PRUPE_ppa002978mg
Prunus persica
PRUPE_ppa002978mg
I
0.843
Bostr.13671s0164
Boechera stricta
Bostr.13671s0164
I
0.840
Bra016749
Brassica rapa
Bra016749
I
0.840
Bostr.0556s0344
Boechera stricta
Bostr.0556s0344
I
0.840
Cucsa.156040
Cucumis sativus
Cucsa.156040
I
0.840
chr1.CM1880.50.nc
Lotus japonicus
chr1.CM1880.50.nc
I
0.840
Cucsa.134750
Cucumis sativus
Cucsa.134750
I
0.840
LjSGA_024382.1
Lotus japonicus
LjSGA_024382.1
I
0.840
estExt_fgenesh1_pg.C_300202
Physcomitrella patens
estExt_fgenesh1_pg.C_300202
I
0.840
mgf012194m
Mimulus guttatus
mgf012194m
I
0.840
mgf015974m
Mimulus guttatus
mgf015974m
I
0.840
Bo8g065080
Brassica oleracea
Bo8g065080
I
0.840
estExt_Genewise1.C_510113
Physcomitrella patens
estExt_Genewise1.C_510113
I
0.840
Bo9g008020
Brassica oleracea
Bo9g008020
I
0.840
Aquca_100_00035
Aquilegia coerulea
Aquca_100_00035
I
0.840
mgf016462m
Mimulus guttatus
mgf016462m
I
0.840
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.840
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.840
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.840
SapurV1A.0672s0200
Salix purpurea
SapurV1A.0672s0200
I
0.840
MDP0000662999
Malus domestica
MDP0000662999
I
0.840
SapurV1A.0517s0250
Salix purpurea
SapurV1A.0517s0250
I
0.840
SapurV1A.0774s0030
Salix purpurea
SapurV1A.0774s0030
I
0.840
MDP0000304669
Malus domestica
MDP0000304669
I
0.840
MDP0000247912
Malus domestica
MDP0000247912
I
0.840
Thhalv10004059m.g
Eutrema salsugineum
Thhalv10004059m.g
I
0.840
orange1.1g011370m.g
Citrus sinensis
orange1.1g011370m.g
I
0.840
SCRM
Arabidopsis thaliana
AT3G26744
D
0.840
Pavir.Eb03736
Panicum virgatum
Pavir.Eb03736
I
0.840
Pavir.Hb00982
Panicum virgatum
Pavir.Hb00982
I
0.840
Pavir.Ea03858
Panicum virgatum
Pavir.Ea03858
I
0.840
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.840
orange1.1g047004m.g
Citrus sinensis
orange1.1g047004m.g
I
0.840
SCRM2
Arabidopsis thaliana
AT1G12860
I
0.840
Lus10043199.g
Linum usitatissimum
Lus10043199.g
I
0.840
Lus10032542.g
Linum usitatissimum
Lus10032542.g
I
0.840
PK06940.1
Cannabis sativa
PK06940.1
I
0.840
Eucgr.G01938
Eucalyptus grandis
Eucgr.G01938
I
0.840
Bo00285s440
Brassica oleracea
Bo00285s440
I
0.840
Ciclev10015052m.g
Citrus clementina
Ciclev10015052m.g
I
0.840
Bo5g016510
Brassica oleracea
Bo5g016510
I
0.840
Bo7g083870
Brassica oleracea
Bo7g083870
I
0.840
Carubv10017099m.g
Capsella rubella
Carubv10017099m.g
I
0.840
evm.TU.supercontig_70.77
Carica papaya
evm.TU.supercontig_70.77
I
0.840
gene06435-v1.0-hybrid
Fragaria vesca
gene06435-v1.0-hybrid
I
0.840
Thhalv10007566m.g
Eutrema salsugineum
Thhalv10007566m.g
I
0.840
BGIOSGA000206
Oryza indica
BGIOSGA000206
I
0.840
Gorai.007G072600
Gossypium raimondii
Gorai.007G072600
I
0.840
Gorai.007G044800
Gossypium raimondii
Gorai.007G044800
I
0.840
BGIOSGA035358
Oryza indica
BGIOSGA035358
I
0.840
Gorai.001G275600
Gossypium raimondii
Gorai.001G275600
I
0.840
Cagra.23157s0001
Capsella grandiflora
Cagra.23157s0001
I
0.840
Ca_01394
Cicer arietinum
Ca_01394
I
0.840
ORUFI11G16280
Oryza rufipogon
ORUFI11G16280
I
0.840
OS01G0928000
Oryza sativa
OS01G0928000
I
0.840
OS11G0523700
Oryza sativa
OS11G0523700
I
0.840
ORUFI01G46010
Oryza rufipogon
ORUFI01G46010
I
0.840
ORGLA11G0129200
Oryza glaberrima
ORGLA11G0129200
I
0.840
GRMZM2G172297
Zea mays
GRMZM2G172297
I
0.840
OPUNC11G12640
Oryza punctata
OPUNC11G12640
I
0.840
ORGLA01G0363500
Oryza glaberrima
ORGLA01G0363500
I
0.840
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.840
PGSC0003DMG401028788
Solanum tuberosum
PGSC0003DMG401028788
I
0.840
PRUPE_ppa018220mg
Prunus persica
PRUPE_ppa018220mg
I
0.840
GLYMA16G05390
Glycine max
GLYMA16G05390
I
0.840
Sb03g044660
Sorghum bicolor
Sb03g044660
I
0.840
PRUPE_ppa005038mg
Prunus persica
PRUPE_ppa005038mg
I
0.840
GLYMA19G27483
Glycine max
GLYMA19G27483
I
0.840
GRMZM2G033356
Zea mays
GRMZM2G033356
I
0.840
POPTR_0012s10780
Populus trichocarpa
POPTR_0012s10780
I
0.840
POPTR_0015s11650
Populus trichocarpa
POPTR_0015s11650
I
0.840
OPUNC01G41620
Oryza punctata
OPUNC01G41620
I
0.840
ONIVA12G10770
Oryza nivara
ONIVA12G10770
I
0.840
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.840
MTR_3g498695
Medicago truncatula
MTR_3g498695
I
0.840
OBART01G42600
Oryza barthii
OBART01G42600
I
0.840
MLOC_76805
Hordeum vulgare
MLOC_76805
I
0.840
GSMUA_Achr6G08070_001
Musa acuminata
GSMUA_Achr6G08070_001
I
0.840
LPERR01G37160
Leersia perrieri
LPERR01G37160
I
0.840
LPERR11G11940
Leersia perrieri
LPERR11G11940
I
0.840
MLOC_46407
Hordeum vulgare
MLOC_46407
I
0.840
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.840
OBART11G15260
Oryza barthii
OBART11G15260
I
0.840
OMERI11G12580
Oryza meridionalis
OMERI11G12580
I
0.840
ONIVA01G48650
Oryza nivara
ONIVA01G48650
I
0.840
GRMZM2G173534
Zea mays
GRMZM2G173534
I
0.840
GSMUA_Achr10G12060_001
Musa acuminata
GSMUA_Achr10G12060_001
I
0.840
OMERI01G39590
Oryza meridionalis
OMERI01G39590
I
0.840
OGLUM01G46870
Oryza glumaepatula
OGLUM01G46870
I
0.840
GSMUA_Achr10G18380_001
Musa acuminata
GSMUA_Achr10G18380_001
I
0.840
OGLUM11G14700
Oryza glumaepatula
OGLUM11G14700
I
0.840
GLYMA06G17330
Glycine max
GLYMA06G17330
I
0.840
Sb05g019530
Sorghum bicolor
Sb05g019530
I
0.840
VIT_17s0000g00330
Vitis vinifera
VIT_17s0000g00330
I
0.840
Cla002682
Citrullus lanatus
Cla002682
I
0.840
Cla003283
Citrullus lanatus
Cla003283
I
0.840
VIT_14s0068g01200
Vitis vinifera
VIT_14s0068g01200
I
0.840
VIT_01s0244g00130
Vitis vinifera
VIT_01s0244g00130
I
0.840
Traes_7DL_2A7EF919F
Triticum aestivum
Traes_7DL_2A7EF919F
I
0.840
TRIUR3_16046
Triticum urartu
TRIUR3_16046
I
0.840
TRIUR3_17003
Triticum urartu
TRIUR3_17003
I
0.840
BRADI4G17460
Brachypodium distachyon
BRADI4G17460
I
0.840
BRADI2G59497
Brachypodium distachyon
BRADI2G59497
I
0.840
cassava17838.valid.m1
Manihot esculenta
cassava17838.valid.m1
I
0.840
Bra025226
Brassica rapa
Bra025226
I
0.840
Bra019794
Brassica rapa
Bra019794
I
0.840
Bra032947
Brassica rapa
Bra032947
I
0.840
30147.m014419
Ricinus communis
30147.m014419
I
0.840
Pm016093
Prunus mume
Pm016093
I
0.840
Bra034246
Brassica rapa
Bra034246
I
0.840
Pm024587
Prunus mume
Pm024587
I
0.840
Traes_7BL_BF5300D88
Triticum aestivum
Traes_7BL_BF5300D88
I
0.840
Traes_7AL_ACAC47D88
Triticum aestivum
Traes_7AL_ACAC47D88
I
0.840
Si001874m.g
Setaria italica
Si001874m.g
I
0.840
AMTR_s00016p00170610
Amborella trichopoda
AMTR_s00016p00170610
I
0.840
GLYMA04G37750
Glycine max
GLYMA04G37750
I
0.840
SELMODRAFT_94010
Selaginella moellendorffii
SELMODRAFT_94010
I
0.840
SELMODRAFT_91237
Selaginella moellendorffii
SELMODRAFT_91237
I
0.840
SELMODRAFT_119431
Selaginella moellendorffii
SELMODRAFT_119431
I
0.840
SELMODRAFT_138758
Selaginella moellendorffii
SELMODRAFT_138758
I
0.840
SELMODRAFT_75047
Selaginella moellendorffii
SELMODRAFT_75047
I
0.840
Si026212m.g
Setaria italica
Si026212m.g
I
0.840
Solyc03g118310.2
Solanum lycopersicum
Solyc03g118310.2
I
0.840
TRAES3BF001100060CFD_g
Triticum aestivum
TRAES3BF001100060CFD_g
I
0.840
Traes_4DS_7B0E8D459
Triticum aestivum
Traes_4DS_7B0E8D459
I
0.840
F775_14780
Aegilops tauschii
F775_14780
I
0.840
F775_15875
Aegilops tauschii
F775_15875
I
0.840
ICE1
Arabidopsis lyrata
fgenesh2_kg.5__441__AT3G26744.2
I
0.840
Solyc06g068870.2
Solanum lycopersicum
Solyc06g068870.2
I
0.840
TCM_014741
Theobroma cacao
TCM_014741
I
0.840
TCM_017336
Theobroma cacao
TCM_017336
I
0.840
cassava37254.valid.m1
Manihot esculenta
cassava37254.valid.m1
I
0.840