OBART02G01550 (Oryza barthii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OBART02G01550 T042092_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AMS
M09782_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AMS_01 		0.848 0.714
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G01550.1 bHLH 290 338

Links

Other bHLH family TFs
Other Oryza barthii TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.914
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.914
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.914
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.914
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.914
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.914
TDR Oryza sativa OS02G0120500 I 0.914
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.914
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.891
mgf024029m Mimulus guttatus mgf024029m I 0.891
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.891
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.891
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.891
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.891
Si019518m.g Setaria italica Si019518m.g I 0.891
Si006500m.g Setaria italica Si006500m.g I 0.891
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.891
mgf019723m Mimulus guttatus mgf019723m I 0.891
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.891
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.891
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.891
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.891
MDP0000243628 Malus domestica MDP0000243628 I 0.879
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.878
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.878
Pm020879 Prunus mume Pm020879 I 0.878
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.878
AMS Populus trichocarpa POPTR_0009s13860 I 0.878
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.867
MDP0000318229 Malus domestica MDP0000318229 I 0.867
MDP0000133262 Malus domestica MDP0000133262 I 0.867
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.867
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.867
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.867
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.867
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.867
Si010413m.g Setaria italica Si010413m.g N 0.867
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.867
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.867
Si010812m.g Setaria italica Si010812m.g N 0.867
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.867
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.867
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.867
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.867
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.867
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.867
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.867
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.867
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.867
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.867
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.867
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.867
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.867
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.867
Cla023112 Citrullus lanatus Cla023112 I 0.867
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.867
30198.m000869 Ricinus communis 30198.m000869 I 0.867
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.867
TCM_039471 Theobroma cacao TCM_039471 I 0.867
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.867
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.867
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.867
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.867
Bra020462 Brassica rapa Bra020462 N 0.867
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.867
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.867
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.867
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.867
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.867
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.867
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.867
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.867
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.867
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.867
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.867
Bo9g130890 Brassica oleracea Bo9g130890 N 0.867
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.867
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.867
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.867
Bra002756 Brassica rapa Bra002756 N 0.867
Bo3g019430 Brassica oleracea Bo3g019430 N 0.867
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.867
OS04G0301500 Oryza sativa OS04G0301500 N 0.867
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.867
Bra006831 Brassica rapa Bra006831 N 0.867
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.866
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.864
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.864
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.861
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.861
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.861
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.861
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.861
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.861
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.861
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.861
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.861
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.861
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.861
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.861
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.861
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.861
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.861
Cla016068 Citrullus lanatus Cla016068 I 0.861
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.861
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.861
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.861
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.861
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.861
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.856
LPERR04G04510 Leersia perrieri LPERR04G04510 N 0.856
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.854
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.854
mgf018455m Mimulus guttatus mgf018455m I 0.854
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.854
Lus10030880.g Linum usitatissimum Lus10030880.g N 0.854
Bo7g016210 Brassica oleracea Bo7g016210 I 0.848
Bra002004 Brassica rapa Bra002004 I 0.848
MDP0000405748 Malus domestica MDP0000405748 I 0.848
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.848
PK03241.1 Cannabis sativa PK03241.1 I 0.848
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.848
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.848
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.848
AMS Arabidopsis thaliana AT2G16910 D 0.848
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.848
Bra013041 Brassica rapa Bra013041 I 0.848
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.848
Bo3g091780 Brassica oleracea Bo3g091780 I 0.848
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.848
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.848
Ca_23693 Cicer arietinum Ca_23693 I 0.848
TCM_006602 Theobroma cacao TCM_006602 I 0.848
Ca_23694 Cicer arietinum Ca_23694 I 0.848
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.848
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.848
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.848
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.848
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.848
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.848
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.848
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.848
Ca_05416 Cicer arietinum Ca_05416 I 0.848
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.848
Cla019147 Citrullus lanatus Cla019147 N 0.843
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.843
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.843
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N 0.843
Cucsa.286080 Cucumis sativus Cucsa.286080 N 0.842
Cla010249 Citrullus lanatus Cla010249 N 0.842
PRUPE_ppa002978mg Prunus persica PRUPE_ppa002978mg I 0.840
Pm020878 Prunus mume Pm020878 N 0.840