CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA02G01430
(
Oryza nivara
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ONIVA02G01430
T042596_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.848
0.714
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA02G01430.1
bHLH
282
330
QCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQ
ONIVA02G01430.2
bHLH
282
323
QCKNLEAERKRRKKLNGHLYKLRSLVPNITKVSYLLVDRHGH
Links
Other
bHLH
family TFs
Other
Oryza nivara
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.914
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.914
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.914
OBART02G01550
Oryza barthii
OBART02G01550
I
0.914
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.914
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.914
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.914
TDR
Oryza sativa
OS02G0120500
I
0.914
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.891
mgf024029m
Mimulus guttatus
mgf024029m
I
0.891
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.891
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.891
Si019518m.g
Setaria italica
Si019518m.g
I
0.891
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.891
Si006500m.g
Setaria italica
Si006500m.g
I
0.891
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.891
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.891
mgf019723m
Mimulus guttatus
mgf019723m
I
0.891
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.891
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.891
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.891
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.891
MDP0000243628
Malus domestica
MDP0000243628
I
0.879
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.878
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.878
Pm020879
Prunus mume
Pm020879
I
0.878
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.878
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.878
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.867
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.867
MDP0000133262
Malus domestica
MDP0000133262
I
0.867
MDP0000318229
Malus domestica
MDP0000318229
I
0.867
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.867
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.867
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.867
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.867
Si010413m.g
Setaria italica
Si010413m.g
N
0.867
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.867
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.867
Si010812m.g
Setaria italica
Si010812m.g
N
0.867
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.867
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.867
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.867
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.867
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.867
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.867
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.867
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.867
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.867
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.867
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.867
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.867
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.867
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.867
Cla023112
Citrullus lanatus
Cla023112
I
0.867
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.867
30198.m000869
Ricinus communis
30198.m000869
I
0.867
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.867
TCM_039471
Theobroma cacao
TCM_039471
I
0.867
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.867
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.867
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.867
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.867
Bra020462
Brassica rapa
Bra020462
N
0.867
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.867
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.867
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.867
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.867
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.867
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.867
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.867
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.867
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.867
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.867
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.867
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.867
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.867
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.867
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.867
Bra002756
Brassica rapa
Bra002756
N
0.867
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.867
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.867
OS04G0301500
Oryza sativa
OS04G0301500
N
0.867
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.867
Bra006831
Brassica rapa
Bra006831
N
0.867
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.866
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.864
GRMZM2G139372
Zea mays
GRMZM2G139372
N
0.864
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.861
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.861
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.861
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.861
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.861
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.861
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.861
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.861
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.861
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.861
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.861
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.861
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.861
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.861
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.861
Cla016068
Citrullus lanatus
Cla016068
I
0.861
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.861
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.861
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.861
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.861
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.861
SapurV1A.0001s2810
Salix purpurea
SapurV1A.0001s2810
N
0.856
LPERR04G04510
Leersia perrieri
LPERR04G04510
N
0.856
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.854
cassava2551.valid.m1
Manihot esculenta
cassava2551.valid.m1
I
0.854
mgf018455m
Mimulus guttatus
mgf018455m
I
0.854
cassava2552.valid.m1
Manihot esculenta
cassava2552.valid.m1
I
0.854
Lus10030880.g
Linum usitatissimum
Lus10030880.g
N
0.854
Bo7g016210
Brassica oleracea
Bo7g016210
I
0.848
Bra002004
Brassica rapa
Bra002004
I
0.848
MDP0000405748
Malus domestica
MDP0000405748
I
0.848
SapurV1A.0140s0250
Salix purpurea
SapurV1A.0140s0250
I
0.848
PK03241.1
Cannabis sativa
PK03241.1
I
0.848
LjSGA_106153.1
Lotus japonicus
LjSGA_106153.1
I
0.848
POPTR_0018s13830
Populus trichocarpa
POPTR_0018s13830
I
0.848
Thhalv10022620m.g
Eutrema salsugineum
Thhalv10022620m.g
I
0.848
AMS
Arabidopsis thaliana
AT2G16910
D
0.848
SapurV1A.0001s2820
Salix purpurea
SapurV1A.0001s2820
I
0.848
Bra013041
Brassica rapa
Bra013041
I
0.848
SapurV1A.3355s0020
Salix purpurea
SapurV1A.3355s0020
I
0.848
Bo3g091780
Brassica oleracea
Bo3g091780
I
0.848
evm.TU.supercontig_20.95
Carica papaya
evm.TU.supercontig_20.95
I
0.848
Cagra.10862s0002
Capsella grandiflora
Cagra.10862s0002
I
0.848
Ca_23693
Cicer arietinum
Ca_23693
I
0.848
TCM_006602
Theobroma cacao
TCM_006602
I
0.848
Ca_23694
Cicer arietinum
Ca_23694
I
0.848
Bostr.18351s0148
Boechera stricta
Bostr.18351s0148
I
0.848
POPTR_0018s13840
Populus trichocarpa
POPTR_0018s13840
I
0.848
GLYMA20G24170
Glycine max
GLYMA20G24170
I
0.848
Carubv10016240m.g
Capsella rubella
Carubv10016240m.g
I
0.848
GLYMA10G42830
Glycine max
GLYMA10G42830
I
0.848
MTR_1g112680
Medicago truncatula
MTR_1g112680
I
0.848
AMS
Arabidopsis lyrata
fgenesh2_kg.3__3272__AT2G16910.1
I
0.848
VIT_01s0127g00860
Vitis vinifera
VIT_01s0127g00860
I
0.848
Ca_05416
Cicer arietinum
Ca_05416
I
0.848
Eucgr.G01783
Eucalyptus grandis
Eucgr.G01783
I
0.848
Cla019147
Citrullus lanatus
Cla019147
N
0.843
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
0.843
Traes_2AL_411B944D6
Triticum aestivum
Traes_2AL_411B944D6
N
0.843
evm.TU.supercontig_115.71
Carica papaya
evm.TU.supercontig_115.71
N
0.843
Cucsa.286080
Cucumis sativus
Cucsa.286080
N
0.842
Cla010249
Citrullus lanatus
Cla010249
N
0.842
PRUPE_ppa002978mg
Prunus persica
PRUPE_ppa002978mg
I
0.840
Pm020878
Prunus mume
Pm020878
N
0.840