Pavir.Ga02255 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ga02255 T050792_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga02255.1.p bHLH 79 127

Links

Other bHLH family TFs
Other Panicum virgatum TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS04G0301500 Oryza sativa OS04G0301500 N 0.913
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.913
Si010413m.g Setaria italica Si010413m.g N 0.913
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.913
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.913
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.913
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.913
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.913
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.913
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.913
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.913
Si010812m.g Setaria italica Si010812m.g N 0.913
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.913
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.913
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.913
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.913
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.913
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.910
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.900
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.893
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.890
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.889
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.889
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.889
Traes_2AL_411B944D6 Triticum aestivum Traes_2AL_411B944D6 N 0.889
Cla019147 Citrullus lanatus Cla019147 N 0.886
mgf019723m Mimulus guttatus mgf019723m I 0.886
Cucsa.282100 Cucumis sativus Cucsa.282100 N 0.886
Si019518m.g Setaria italica Si019518m.g I 0.886
BRADI5G01900 Brachypodium distachyon BRADI5G01900 N 0.878
Traes_2BL_070D9E2AD Triticum aestivum Traes_2BL_070D9E2AD N 0.878
F775_04545 Aegilops tauschii F775_04545 N 0.878
F775_11333 Aegilops tauschii F775_11333 N 0.878
Traes_2DL_8BE259F4B Triticum aestivum Traes_2DL_8BE259F4B N 0.878
Traes_4DL_55503B3CD Triticum aestivum Traes_4DL_55503B3CD N 0.878
Pavir.J18808 Panicum virgatum Pavir.J18808 N 0.878
Pavir.Gb02374 Panicum virgatum Pavir.Gb02374 N 0.878
Pavir.Ga02257 Panicum virgatum Pavir.Ga02257 N 0.878
Traes_5AL_331CE753D Triticum aestivum Traes_5AL_331CE753D N 0.878
Si010685m.g Setaria italica Si010685m.g N 0.878
TRIUR3_16896 Triticum urartu TRIUR3_16896 N 0.878
MLOC_44850 Hordeum vulgare MLOC_44850 N 0.878
PDK_20s1308051g001 Phoenix dactylifera PDK_20s1308051g001 N 0.875
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.873
Pm020879 Prunus mume Pm020879 I 0.873
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.869
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.866
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.866
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.866
Bo9g130890 Brassica oleracea Bo9g130890 N 0.866
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.866
Si006500m.g Setaria italica Si006500m.g I 0.866
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.866
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.866
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.866
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.866
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.866
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.866
mgf024029m Mimulus guttatus mgf024029m I 0.866
Bra002756 Brassica rapa Bra002756 N 0.866
Bra020462 Brassica rapa Bra020462 N 0.866
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.866
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.866
TDR Oryza sativa OS02G0120500 I 0.866
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.866
OBART02G01550 Oryza barthii OBART02G01550 I 0.866
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.866
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.866
Bra006831 Brassica rapa Bra006831 N 0.866
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.866
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.866
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.866
Bo3g019430 Brassica oleracea Bo3g019430 N 0.866
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.862
30198.m000869 Ricinus communis 30198.m000869 I 0.862
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.862
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.862
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.862
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.862
MDP0000318229 Malus domestica MDP0000318229 I 0.862
MDP0000133262 Malus domestica MDP0000133262 I 0.862
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.862
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.862
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.862
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.862
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.862
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.862
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.862
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.862
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.862
TCM_039471 Theobroma cacao TCM_039471 I 0.862
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.862
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.862
Solyc05g014590.2 Solanum lycopersicum Solyc05g014590.2 I 0.859
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.859
PGSC0003DMG400017440 Solanum tuberosum PGSC0003DMG400017440 I 0.859
OGLUM04G06620 Oryza glumaepatula OGLUM04G06620 N 0.857
OBART04G06880 Oryza barthii OBART04G06880 N 0.857
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.856
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.856
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.856
Cla016068 Citrullus lanatus Cla016068 I 0.856
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.856
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.856
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.856
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.856
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.856
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.856
MDP0000243628 Malus domestica MDP0000243628 I 0.854
Lus10030880.g Linum usitatissimum Lus10030880.g N 0.854
AMS Populus trichocarpa POPTR_0009s13860 I 0.853
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.853
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.853
SapurV1A.0001s2810 Salix purpurea SapurV1A.0001s2810 N 0.851
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.850
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.850
TCM_006602 Theobroma cacao TCM_006602 I 0.843
PK03241.1 Cannabis sativa PK03241.1 I 0.843
Cucsa.286080 Cucumis sativus Cucsa.286080 N 0.842
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.842
Cla010249 Citrullus lanatus Cla010249 N 0.842
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.842
evm.TU.supercontig_115.71 Carica papaya evm.TU.supercontig_115.71 N 0.842
Cla023112 Citrullus lanatus Cla023112 I 0.842
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.842
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.842
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.842
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.842
MLOC_13653 Hordeum vulgare MLOC_13653 N 0.840
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.839
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.839