CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK03241.1
(
Cannabis sativa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
PK03241.1
T051561_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.864
0.851
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.857
0.809
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK03241.1
bHLH
41
87
KNLFAERRRRKKLNERLYTLRSLVPKISKLDRASILGDAIEYVKDLQ
Links
Other
bHLH
family TFs
Other
Cannabis sativa
TFs
262 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_006602
Theobroma cacao
TCM_006602
I
0.914
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.901
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.901
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.901
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.901
Cla016068
Citrullus lanatus
Cla016068
I
0.901
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.901
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.901
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.901
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.898
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.898
VIT_01s0127g00860
Vitis vinifera
VIT_01s0127g00860
I
0.894
Eucgr.G01783
Eucalyptus grandis
Eucgr.G01783
I
0.894
evm.TU.supercontig_20.95
Carica papaya
evm.TU.supercontig_20.95
I
0.894
SapurV1A.0140s0250
Salix purpurea
SapurV1A.0140s0250
I
0.891
POPTR_0018s13830
Populus trichocarpa
POPTR_0018s13830
I
0.891
SapurV1A.3355s0020
Salix purpurea
SapurV1A.3355s0020
I
0.891
Gorai.008G036900
Gossypium raimondii
Gorai.008G036900
I
0.890
PGSC0003DMG400008195
Solanum tuberosum
PGSC0003DMG400008195
I
0.890
Solyc08g062780.1
Solanum lycopersicum
Solyc08g062780.1
I
0.890
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.884
Pm020879
Prunus mume
Pm020879
I
0.884
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.881
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.881
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.881
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.881
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.881
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.881
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.878
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.878
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.878
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.878
PRUPE_ppa010972mg
Prunus persica
PRUPE_ppa010972mg
I
0.877
Pm008898
Prunus mume
Pm008898
I
0.877
PGSC0003DMG400017440
Solanum tuberosum
PGSC0003DMG400017440
I
0.874
Solyc05g014590.2
Solanum lycopersicum
Solyc05g014590.2
I
0.874
Si019518m.g
Setaria italica
Si019518m.g
I
0.871
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.868
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.868
mgf019723m
Mimulus guttatus
mgf019723m
I
0.868
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.868
SapurV1A.3355s0010
Salix purpurea
SapurV1A.3355s0010
I
0.867
SapurV1A.0140s0240
Salix purpurea
SapurV1A.0140s0240
I
0.867
POPTR_0018s13850
Populus trichocarpa
POPTR_0018s13850
I
0.867
MTR_1g112680
Medicago truncatula
MTR_1g112680
I
0.864
AMS
Arabidopsis thaliana
AT2G16910
D
0.864
Ca_05416
Cicer arietinum
Ca_05416
I
0.864
Carubv10016240m.g
Capsella rubella
Carubv10016240m.g
I
0.864
Ca_23693
Cicer arietinum
Ca_23693
I
0.864
Ca_23694
Cicer arietinum
Ca_23694
I
0.864
LjSGA_106153.1
Lotus japonicus
LjSGA_106153.1
I
0.864
Bostr.18351s0148
Boechera stricta
Bostr.18351s0148
I
0.864
Cagra.10862s0002
Capsella grandiflora
Cagra.10862s0002
I
0.864
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.864
Thhalv10022620m.g
Eutrema salsugineum
Thhalv10022620m.g
I
0.864
GLYMA10G42830
Glycine max
GLYMA10G42830
I
0.864
MDP0000405748
Malus domestica
MDP0000405748
I
0.864
Bra013041
Brassica rapa
Bra013041
I
0.864
Bra002004
Brassica rapa
Bra002004
I
0.864
GLYMA20G24170
Glycine max
GLYMA20G24170
I
0.864
AMS
Arabidopsis lyrata
fgenesh2_kg.3__3272__AT2G16910.1
I
0.864
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.864
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.864
Bo7g016210
Brassica oleracea
Bo7g016210
I
0.864
Bo3g091780
Brassica oleracea
Bo3g091780
I
0.864
OMERI03G04040
Oryza meridionalis
OMERI03G04040
N
0.863
OPUNC04G05620
Oryza punctata
OPUNC04G05620
N
0.863
ORGLA04G0051300
Oryza glaberrima
ORGLA04G0051300
N
0.863
ORUFI04G07840
Oryza rufipogon
ORUFI04G07840
N
0.863
OGLUM04G06590
Oryza glumaepatula
OGLUM04G06590
N
0.863
OS04G0300600
Oryza sativa
OS04G0300600
N
0.863
OBART04G06800
Oryza barthii
OBART04G06800
N
0.863
POPTR_0018s13840
Populus trichocarpa
POPTR_0018s13840
I
0.861
SapurV1A.0001s2820
Salix purpurea
SapurV1A.0001s2820
I
0.861
Cla003283
Citrullus lanatus
Cla003283
I
0.857
Cla002682
Citrullus lanatus
Cla002682
I
0.857
Traes_7DL_2A7EF919F
Triticum aestivum
Traes_7DL_2A7EF919F
I
0.857
VIT_01s0244g00130
Vitis vinifera
VIT_01s0244g00130
I
0.857
TRIUR3_17003
Triticum urartu
TRIUR3_17003
I
0.857
Traes_7AL_ACAC47D88
Triticum aestivum
Traes_7AL_ACAC47D88
I
0.857
Traes_7BL_BF5300D88
Triticum aestivum
Traes_7BL_BF5300D88
I
0.857
VIT_14s0068g01200
Vitis vinifera
VIT_14s0068g01200
I
0.857
Si026212m.g
Setaria italica
Si026212m.g
I
0.857
TRAES3BF001100060CFD_g
Triticum aestivum
TRAES3BF001100060CFD_g
I
0.857
TCM_017336
Theobroma cacao
TCM_017336
I
0.857
TCM_014741
Theobroma cacao
TCM_014741
I
0.857
VIT_17s0000g00330
Vitis vinifera
VIT_17s0000g00330
I
0.857
Solyc03g118310.2
Solanum lycopersicum
Solyc03g118310.2
I
0.857
Ca_01394
Cicer arietinum
Ca_01394
I
0.857
mgf016462m
Mimulus guttatus
mgf016462m
I
0.857
orange1.1g011370m.g
Citrus sinensis
orange1.1g011370m.g
I
0.857
orange1.1g047004m.g
Citrus sinensis
orange1.1g047004m.g
I
0.857
Pavir.Ea03858
Panicum virgatum
Pavir.Ea03858
I
0.857
Pavir.Eb03736
Panicum virgatum
Pavir.Eb03736
I
0.857
MDP0000662999
Malus domestica
MDP0000662999
I
0.857
MDP0000304669
Malus domestica
MDP0000304669
I
0.857
Gorai.007G044800
Gossypium raimondii
Gorai.007G044800
I
0.857
Gorai.007G072600
Gossypium raimondii
Gorai.007G072600
I
0.857
MDP0000247912
Malus domestica
MDP0000247912
I
0.857
Pavir.Hb00982
Panicum virgatum
Pavir.Hb00982
I
0.857
SapurV1A.0517s0250
Salix purpurea
SapurV1A.0517s0250
I
0.857
PK06940.1
Cannabis sativa
PK06940.1
I
0.857
chr1.CM1880.50.nc
Lotus japonicus
chr1.CM1880.50.nc
I
0.857
LjSGA_024382.1
Lotus japonicus
LjSGA_024382.1
I
0.857
PK06841.1
Cannabis sativa
PK06841.1
I
0.857
Thhalv10007566m.g
Eutrema salsugineum
Thhalv10007566m.g
I
0.857
SapurV1A.0672s0200
Salix purpurea
SapurV1A.0672s0200
I
0.857
SapurV1A.0774s0030
Salix purpurea
SapurV1A.0774s0030
I
0.857
Thhalv10004059m.g
Eutrema salsugineum
Thhalv10004059m.g
I
0.857
Gorai.001G275600
Gossypium raimondii
Gorai.001G275600
I
0.857
gene06435-v1.0-hybrid
Fragaria vesca
gene06435-v1.0-hybrid
I
0.857
Cucsa.156040
Cucumis sativus
Cucsa.156040
I
0.857
estExt_fgenesh1_pg.C_300202
Physcomitrella patens
estExt_fgenesh1_pg.C_300202
I
0.857
estExt_Genewise1.C_510113
Physcomitrella patens
estExt_Genewise1.C_510113
I
0.857
mgf012194m
Mimulus guttatus
mgf012194m
I
0.857
Cucsa.134750
Cucumis sativus
Cucsa.134750
I
0.857
cassava37254.valid.m1
Manihot esculenta
cassava37254.valid.m1
I
0.857
Pm024587
Prunus mume
Pm024587
I
0.857
30147.m014419
Ricinus communis
30147.m014419
I
0.857
cassava17838.valid.m1
Manihot esculenta
cassava17838.valid.m1
I
0.857
mgf015974m
Mimulus guttatus
mgf015974m
I
0.857
Si001874m.g
Setaria italica
Si001874m.g
I
0.857
Ciclev10015052m.g
Citrus clementina
Ciclev10015052m.g
I
0.857
Eucgr.G01938
Eucalyptus grandis
Eucgr.G01938
I
0.857
evm.TU.supercontig_70.77
Carica papaya
evm.TU.supercontig_70.77
I
0.857
Carubv10017099m.g
Capsella rubella
Carubv10017099m.g
I
0.857
Cagra.23157s0001
Capsella grandiflora
Cagra.23157s0001
I
0.857
Aquca_100_00035
Aquilegia coerulea
Aquca_100_00035
I
0.857
Bostr.0556s0344
Boechera stricta
Bostr.0556s0344
I
0.857
Bostr.13671s0164
Boechera stricta
Bostr.13671s0164
I
0.857
Pm016093
Prunus mume
Pm016093
I
0.857
SELMODRAFT_94010
Selaginella moellendorffii
SELMODRAFT_94010
I
0.857
OGLUM11G14700
Oryza glumaepatula
OGLUM11G14700
I
0.857
OMERI01G39590
Oryza meridionalis
OMERI01G39590
I
0.857
OMERI11G12580
Oryza meridionalis
OMERI11G12580
I
0.857
OGLUM01G46870
Oryza glumaepatula
OGLUM01G46870
I
0.857
OBART11G15260
Oryza barthii
OBART11G15260
I
0.857
F775_14780
Aegilops tauschii
F775_14780
I
0.857
OBART01G42600
Oryza barthii
OBART01G42600
I
0.857
BRADI2G59497
Brachypodium distachyon
BRADI2G59497
I
0.857
Bra034246
Brassica rapa
Bra034246
I
0.857
OPUNC11G12640
Oryza punctata
OPUNC11G12640
I
0.857
ORGLA01G0363500
Oryza glaberrima
ORGLA01G0363500
I
0.857
ORGLA11G0129200
Oryza glaberrima
ORGLA11G0129200
I
0.857
Bra025226
Brassica rapa
Bra025226
I
0.857
Bra032947
Brassica rapa
Bra032947
I
0.857
ONIVA01G48650
Oryza nivara
ONIVA01G48650
I
0.857
OPUNC01G41620
Oryza punctata
OPUNC01G41620
I
0.857
MTR_3g498695
Medicago truncatula
MTR_3g498695
I
0.857
MLOC_76805
Hordeum vulgare
MLOC_76805
I
0.857
GRMZM2G173534
Zea mays
GRMZM2G173534
I
0.857
GSMUA_Achr10G12060_001
Musa acuminata
GSMUA_Achr10G12060_001
I
0.857
GSMUA_Achr10G18380_001
Musa acuminata
GSMUA_Achr10G18380_001
I
0.857
GRMZM2G172297
Zea mays
GRMZM2G172297
I
0.857
GRMZM2G033356
Zea mays
GRMZM2G033356
I
0.857
GLYMA16G05390
Glycine max
GLYMA16G05390
I
0.857
GLYMA19G27483
Glycine max
GLYMA19G27483
I
0.857
GSMUA_Achr6G08070_001
Musa acuminata
GSMUA_Achr6G08070_001
I
0.857
GLYMA06G17330
Glycine max
GLYMA06G17330
I
0.857
MLOC_46407
Hordeum vulgare
MLOC_46407
I
0.857
ICE1
Arabidopsis lyrata
fgenesh2_kg.5__441__AT3G26744.2
I
0.857
LPERR11G11940
Leersia perrieri
LPERR11G11940
I
0.857
GLYMA04G37750
Glycine max
GLYMA04G37750
I
0.857
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.857
LPERR01G37160
Leersia perrieri
LPERR01G37160
I
0.857
ORUFI01G46010
Oryza rufipogon
ORUFI01G46010
I
0.857
ONIVA12G10770
Oryza nivara
ONIVA12G10770
I
0.857
Bo7g083870
Brassica oleracea
Bo7g083870
I
0.857
POPTR_0012s10780
Populus trichocarpa
POPTR_0012s10780
I
0.857
SELMODRAFT_119431
Selaginella moellendorffii
SELMODRAFT_119431
I
0.857
SCRM
Arabidopsis thaliana
AT3G26744
D
0.857
Sb03g044660
Sorghum bicolor
Sb03g044660
I
0.857
BGIOSGA000206
Oryza indica
BGIOSGA000206
I
0.857
POPTR_0015s11650
Populus trichocarpa
POPTR_0015s11650
I
0.857
Bo00285s440
Brassica oleracea
Bo00285s440
I
0.857
PRUPE_ppa018220mg
Prunus persica
PRUPE_ppa018220mg
I
0.857
PRUPE_ppa005038mg
Prunus persica
PRUPE_ppa005038mg
I
0.857
Sb05g019530
Sorghum bicolor
Sb05g019530
I
0.857
Bo5g016510
Brassica oleracea
Bo5g016510
I
0.857
Bo8g065080
Brassica oleracea
Bo8g065080
I
0.857
OS11G0523700
Oryza sativa
OS11G0523700
I
0.857
SCRM2
Arabidopsis thaliana
AT1G12860
I
0.857
ORUFI11G16280
Oryza rufipogon
ORUFI11G16280
I
0.857
Bra016749
Brassica rapa
Bra016749
I
0.857
Bra019794
Brassica rapa
Bra019794
I
0.857
OS01G0928000
Oryza sativa
OS01G0928000
I
0.857
AMTR_s00016p00170610
Amborella trichopoda
AMTR_s00016p00170610
I
0.857
Bo9g008020
Brassica oleracea
Bo9g008020
I
0.857
SELMODRAFT_138758
Selaginella moellendorffii
SELMODRAFT_138758
I
0.857
SELMODRAFT_75047
Selaginella moellendorffii
SELMODRAFT_75047
I
0.857
BGIOSGA035358
Oryza indica
BGIOSGA035358
I
0.857
SELMODRAFT_91237
Selaginella moellendorffii
SELMODRAFT_91237
I
0.857
Si006199m.g
Setaria italica
Si006199m.g
I
0.854
VIT_03s0038g02540
Vitis vinifera
VIT_03s0038g02540
I
0.853
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.851
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.851
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.851
mgf024029m
Mimulus guttatus
mgf024029m
I
0.851
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.851
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.851
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.851
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.851
Si006500m.g
Setaria italica
Si006500m.g
I
0.848
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.848
TDR
Oryza sativa
OS02G0120500
I
0.848
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.848
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.848
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.848
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.848
OBART02G01550
Oryza barthii
OBART02G01550
I
0.848
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.848
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.848
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.848
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.847
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.847
MDP0000133262
Malus domestica
MDP0000133262
I
0.847
MDP0000318229
Malus domestica
MDP0000318229
I
0.847
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.847
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.847
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.847
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.847
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.847
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.847
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.847
30198.m000869
Ricinus communis
30198.m000869
I
0.847
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.847
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.847
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.847
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.847
TCM_039471
Theobroma cacao
TCM_039471
I
0.847
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.847
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.847
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.847
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.847
Ca_23892
Cicer arietinum
Ca_23892
I
0.846
Pavir.Ha01426
Panicum virgatum
Pavir.Ha01426
I
0.846
MTR_7g083900
Medicago truncatula
MTR_7g083900
I
0.846
GSMUA_Achr11G09640_001
Musa acuminata
GSMUA_Achr11G09640_001
I
0.846
GRMZM2G139372
Zea mays
GRMZM2G139372
N
0.845
Lus10030609.g
Linum usitatissimum
Lus10030609.g
N
0.845
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.844
Si010812m.g
Setaria italica
Si010812m.g
N
0.844
Si010413m.g
Setaria italica
Si010413m.g
N
0.844
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.844
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.844
OS04G0301500
Oryza sativa
OS04G0301500
N
0.844
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.844
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.844
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.844
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.844
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.844
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.844
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.844
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.844
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.844
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.844
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.844
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.843
mgf018455m
Mimulus guttatus
mgf018455m
I
0.840
ONIVA01G07150
Oryza nivara
ONIVA01G07150
N
0.839
MDP0000243628
Malus domestica
MDP0000243628
I
0.839
BGIOSGA015389
Oryza indica
BGIOSGA015389
N
0.839