CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G139372
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM2G139372
T039899_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G139372_P01
bHLH
145
193
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P02
bHLH
293
341
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P03
bHLH
330
378
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P04
bHLH
262
310
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P05
bHLH
176
224
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P06
bHLH
330
378
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
GRMZM2G139372_P07
bHLH
361
409
QCKNLEAERKRRKKLNERLYKLRSLVPNISKMDRAAILGDAIDYIVGLQ
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
110 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.894
Pm020878
Prunus mume
Pm020878
N
0.890
Si019518m.g
Setaria italica
Si019518m.g
I
0.888
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.885
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.885
mgf019723m
Mimulus guttatus
mgf019723m
I
0.885
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.885
Pm020879
Prunus mume
Pm020879
I
0.875
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.875
PRUPE_ppa002978mg
Prunus persica
PRUPE_ppa002978mg
I
0.870
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.867
mgf024029m
Mimulus guttatus
mgf024029m
I
0.867
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.867
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.867
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.867
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.867
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.867
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.864
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.864
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.864
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.864
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.864
TDR
Oryza sativa
OS02G0120500
I
0.864
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.864
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.864
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.864
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.864
30198.m000869
Ricinus communis
30198.m000869
I
0.864
TCM_039471
Theobroma cacao
TCM_039471
I
0.864
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.864
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.864
Si006500m.g
Setaria italica
Si006500m.g
I
0.864
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.864
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.864
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.864
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.864
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.864
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.864
MDP0000133262
Malus domestica
MDP0000133262
I
0.864
MDP0000318229
Malus domestica
MDP0000318229
I
0.864
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.864
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.864
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.864
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.864
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.864
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.864
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.864
OBART02G01550
Oryza barthii
OBART02G01550
I
0.864
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.864
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.860
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.860
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.860
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.860
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.860
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.860
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.860
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.860
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.860
OS04G0301500
Oryza sativa
OS04G0301500
N
0.860
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.860
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.860
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.860
Si010812m.g
Setaria italica
Si010812m.g
N
0.860
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.860
Si010413m.g
Setaria italica
Si010413m.g
N
0.860
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.860
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.859
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.858
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.858
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.858
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.858
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.858
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.858
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.858
Cla016068
Citrullus lanatus
Cla016068
I
0.858
MDP0000243628
Malus domestica
MDP0000243628
I
0.856
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.855
Ca_14482
Cicer arietinum
Ca_14482
N
0.855
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.855
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.855
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.854
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.854
SapurV1A.0001s2810
Salix purpurea
SapurV1A.0001s2810
N
0.852
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.848
PK03241.1
Cannabis sativa
PK03241.1
I
0.845
TCM_006602
Theobroma cacao
TCM_006602
I
0.845
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.843
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.843
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.843
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.843
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.843
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.843
Bra002756
Brassica rapa
Bra002756
N
0.843
Bra006831
Brassica rapa
Bra006831
N
0.843
Bra020462
Brassica rapa
Bra020462
N
0.843
Cla023112
Citrullus lanatus
Cla023112
I
0.843
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.843
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.843
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.843
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.843
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.843
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.843
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.843
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.843
Cla019147
Citrullus lanatus
Cla019147
N
0.840
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.840
SCRM2
Arabidopsis lyrata
Al_scaffold_0001_1326
I
0.840
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
0.840
PRUPE_ppa021593mg
Prunus persica
PRUPE_ppa021593mg
N
0.838