CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.8__1627__AT5G57150.1
(
Arabidopsis lyrata
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
fgenesh2_kg.8__1627__AT5G57150.1
T039170_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.8__1627__AT5G57150.1
bHLH
52
100
ASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIKGLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis lyrata
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra002756
Brassica rapa
Bra002756
N
0.914
Bra006831
Brassica rapa
Bra006831
N
0.914
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.914
Bra020462
Brassica rapa
Bra020462
N
0.914
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.914
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.914
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.914
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.914
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.914
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.890
mgf024029m
Mimulus guttatus
mgf024029m
I
0.890
Lus10030880.g
Linum usitatissimum
Lus10030880.g
N
0.878
MDP0000243628
Malus domestica
MDP0000243628
I
0.878
Cagra.0268s0010
Capsella grandiflora
Cagra.0268s0010
N
0.877
Bostr.7867s0840
Boechera stricta
Bostr.7867s0840
N
0.877
Carubv10006422m.g
Capsella rubella
Carubv10006422m.g
N
0.877
Thhalv10027332m.g
Eutrema salsugineum
Thhalv10027332m.g
N
0.877
Bra024115
Brassica rapa
Bra024115
N
0.877
BHLH27
Arabidopsis thaliana
AT4G29930
N
0.877
Bo7g114110
Brassica oleracea
Bo7g114110
N
0.877
fgenesh2_kg.7__1196__AT4G29930.1
Arabidopsis lyrata
fgenesh2_kg.7__1196__AT4G29930.1
N
0.874
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.870
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.870
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.870
Si019518m.g
Setaria italica
Si019518m.g
I
0.870
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.870
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.870
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.870
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.870
OS04G0301500
Oryza sativa
OS04G0301500
N
0.867
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.867
TDR
Oryza sativa
OS02G0120500
I
0.867
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.867
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.867
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.867
Si010413m.g
Setaria italica
Si010413m.g
N
0.867
Si010812m.g
Setaria italica
Si010812m.g
N
0.867
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.867
mgf019723m
Mimulus guttatus
mgf019723m
I
0.867
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.867
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.867
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.867
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.867
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.867
Si006500m.g
Setaria italica
Si006500m.g
I
0.867
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.867
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.867
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.867
OBART02G01550
Oryza barthii
OBART02G01550
I
0.867
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.867
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.867
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.867
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.867
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.867
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.867
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.867
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.867
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.867
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.867
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.867
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.867
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.867
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.866
Si006199m.g
Setaria italica
Si006199m.g
I
0.861
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.857
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.857
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.857
Pm020879
Prunus mume
Pm020879
I
0.857
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.857
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.854
Bo1g014720
Brassica oleracea
Bo1g014720
N
0.853
Bra011152
Brassica rapa
Bra011152
N
0.853
POPTR_0018s13850
Populus trichocarpa
POPTR_0018s13850
I
0.848
Lus10030609.g
Linum usitatissimum
Lus10030609.g
N
0.848
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.846
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.846
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.846
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.846
evm.TU.supercontig_115.71
Carica papaya
evm.TU.supercontig_115.71
N
0.846
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.846
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.846
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.846
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.846
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.846
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.846
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.846
Cla023112
Citrullus lanatus
Cla023112
I
0.846
TCM_039471
Theobroma cacao
TCM_039471
I
0.846
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.846
MDP0000318229
Malus domestica
MDP0000318229
I
0.846
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.846
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.846
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.846
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.846
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.846
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.846
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.846
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.846
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
0.846
30198.m000869
Ricinus communis
30198.m000869
I
0.846
Cla019147
Citrullus lanatus
Cla019147
N
0.846
MDP0000133262
Malus domestica
MDP0000133262
I
0.846
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.846
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.846
Cucsa.286080
Cucumis sativus
Cucsa.286080
N
0.845
Cla010249
Citrullus lanatus
Cla010249
N
0.845
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.843
Traes_2AL_411B944D6
Triticum aestivum
Traes_2AL_411B944D6
N
0.843
GRMZM2G139372
Zea mays
GRMZM2G139372
N
0.843
PRUPE_ppa021593mg
Prunus persica
PRUPE_ppa021593mg
N
0.842
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.840
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.840
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.840
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.840
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.840
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.840
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.840
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.840
MDP0000219146
Malus domestica
MDP0000219146
I
0.840
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.840
gw1.257.54.1
Physcomitrella patens
gw1.257.54.1
I
0.840
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.840
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.840
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.840
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.840
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.840
Cla016068
Citrullus lanatus
Cla016068
I
0.840
Carubv10007380m.g
Capsella rubella
Carubv10007380m.g
I
0.839
Cagra.1062s0003
Capsella grandiflora
Cagra.1062s0003
I
0.839