AMTR_s00019p00254380 (Amborella trichopoda)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AMTR_s00019p00254380 T030489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.871 0.653
SCRM
M09784_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.860 0.694
DYT1
M02654_2.00
Arabidopsis thaliana
TCACGTGWYTBRYK

MRYVARWCACGTGA
SELEX
Mathelier et al.(2014)
MA0580.1
0.845 0.551
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN07465 bHLH 79 127

Links

Other bHLH family TFs
Other Amborella trichopoda TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000405748 Malus domestica MDP0000405748 I 0.901
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.884
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.884
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.884
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.884
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.884
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.884
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.884
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.884
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.884
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.884
Si006500m.g Setaria italica Si006500m.g I 0.881
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.881
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.881
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.881
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.881
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.881
Ciclev10030105m.g Citrus clementina Ciclev10030105m.g I 0.875
orange1.1g045155m.g Citrus sinensis orange1.1g045155m.g I 0.875
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.871
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.871
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.871
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.871
Ca_05416 Cicer arietinum Ca_05416 I 0.871
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.871
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.871
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.871
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.871
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.871
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.871
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.871
Ca_23693 Cicer arietinum Ca_23693 I 0.871
Ca_23694 Cicer arietinum Ca_23694 I 0.871
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.871
AMS Populus trichocarpa POPTR_0009s13860 I 0.871
Bra002004 Brassica rapa Bra002004 I 0.871
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.871
Bra013041 Brassica rapa Bra013041 I 0.871
Bo3g091780 Brassica oleracea Bo3g091780 I 0.871
Bo7g016210 Brassica oleracea Bo7g016210 I 0.871
AMS Arabidopsis thaliana AT2G16910 D 0.871
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.871
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.868
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.868
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.868
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.868
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.868
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.864
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.864
Si019518m.g Setaria italica Si019518m.g I 0.864
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.864
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.864
mgf024029m Mimulus guttatus mgf024029m I 0.864
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.864
Cla016068 Citrullus lanatus Cla016068 I 0.864
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.864
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.864
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.864
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.864
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.861
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.861
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.861
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.861
OBART02G01550 Oryza barthii OBART02G01550 I 0.861
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.861
mgf019723m Mimulus guttatus mgf019723m I 0.861
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.861
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.861
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.861
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.861
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.861
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.861
TDR Oryza sativa OS02G0120500 I 0.861
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.861
Cla023112 Citrullus lanatus Cla023112 I 0.860
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.860
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.860
PK06940.1 Cannabis sativa PK06940.1 I 0.860
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.860
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.860
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.860
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.860
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.860
Pm016093 Prunus mume Pm016093 I 0.860
Pm024587 Prunus mume Pm024587 I 0.860
30147.m014419 Ricinus communis 30147.m014419 I 0.860
Cla002682 Citrullus lanatus Cla002682 I 0.860
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.860
TRIUR3_16046 Triticum urartu TRIUR3_16046 I 0.860
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.860
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.860
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.860
Traes_4DS_7B0E8D459 Triticum aestivum Traes_4DS_7B0E8D459 I 0.860
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.860
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.860
Bo8g065080 Brassica oleracea Bo8g065080 I 0.860
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.860
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.860
Bo5g016510 Brassica oleracea Bo5g016510 I 0.860
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.860
Bo7g083870 Brassica oleracea Bo7g083870 I 0.860
Ca_01394 Cicer arietinum Ca_01394 I 0.860
MDP0000247912 Malus domestica MDP0000247912 I 0.860
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.860
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.860
Cla003283 Citrullus lanatus Cla003283 I 0.860
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.860
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.860
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.860
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.860
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.860
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.860
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.860
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.860
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.860
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.860
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.860
SCRM2 Arabidopsis thaliana AT1G12860 I 0.860
F775_15875 Aegilops tauschii F775_15875 I 0.860
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.860
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.860
SCRM Arabidopsis thaliana AT3G26744 D 0.860
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.860
Bo00285s440 Brassica oleracea Bo00285s440 I 0.860
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.860
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.860
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.860
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.860
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.860
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.860
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.860
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.860
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.860
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.860
mgf016462m Mimulus guttatus mgf016462m I 0.860
mgf015974m Mimulus guttatus mgf015974m I 0.860
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.860
mgf012194m Mimulus guttatus mgf012194m I 0.860
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.860
Bo9g008020 Brassica oleracea Bo9g008020 I 0.860
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.860
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.860
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.860
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.860
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.860
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.860
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.860
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.860
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.860
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.860
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.860
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.860
OS11G0523700 Oryza sativa OS11G0523700 I 0.860
OS01G0928000 Oryza sativa OS01G0928000 I 0.860
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.860
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.860
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.860
OBART11G15260 Oryza barthii OBART11G15260 I 0.860
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.860
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.860
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.860
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.860
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.860
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.860
Bra025226 Brassica rapa Bra025226 I 0.860
Bra019794 Brassica rapa Bra019794 I 0.860
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.860
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.860
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.860
OBART01G42600 Oryza barthii OBART01G42600 I 0.860
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.860
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.860
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.860
Bra016749 Brassica rapa Bra016749 I 0.860
MDP0000304669 Malus domestica MDP0000304669 I 0.860
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.860
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.860
Si001874m.g Setaria italica Si001874m.g I 0.860
PK06841.1 Cannabis sativa PK06841.1 I 0.860
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.860
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.860
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.860
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.860
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.860
Si026212m.g Setaria italica Si026212m.g I 0.860
TCM_014741 Theobroma cacao TCM_014741 I 0.860
TCM_017336 Theobroma cacao TCM_017336 I 0.860
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.860
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.860
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.860
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.860
F775_14780 Aegilops tauschii F775_14780 I 0.860
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.860
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.860
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.860
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.860
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.860
Bra032947 Brassica rapa Bra032947 I 0.860
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.860
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.860
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.860
MDP0000662999 Malus domestica MDP0000662999 I 0.860
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.860
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.860
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.860
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.860
Bra034246 Brassica rapa Bra034246 I 0.860
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.858
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.857
MDP0000243628 Malus domestica MDP0000243628 I 0.852
PK03241.1 Cannabis sativa PK03241.1 I 0.851
TCM_006602 Theobroma cacao TCM_006602 I 0.851
Pm020879 Prunus mume Pm020879 I 0.851
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.851
Ca_23892 Cicer arietinum Ca_23892 I 0.849
MLOC_56814 Hordeum vulgare MLOC_56814 I 0.849
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.849
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.849
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.849
mgf018455m Mimulus guttatus mgf018455m I 0.847
cassava2552.valid.m1 Manihot esculenta cassava2552.valid.m1 I 0.847
cassava2551.valid.m1 Manihot esculenta cassava2551.valid.m1 I 0.847
MDP0000283606 Malus domestica MDP0000283606 N 0.845
MTR_4g091910 Medicago truncatula MTR_4g091910 I 0.845
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I 0.845
Bra013519 Brassica rapa Bra013519 I 0.845
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I 0.845
Bo3g162600 Brassica oleracea Bo3g162600 I 0.845
Cagra.1062s0003 Capsella grandiflora Cagra.1062s0003 I 0.845
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I 0.845
DYT1 Arabidopsis thaliana AT4G21330 D 0.845
Carubv10007380m.g Capsella rubella Carubv10007380m.g I 0.845
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.844
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.844
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.844
29842.m003700 Ricinus communis 29842.m003700 N 0.842
AT5G57150 Arabidopsis thaliana AT5G57150 N 0.840
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.840
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.840
fgenesh2_kg.8__1627__AT5G57150.1 Arabidopsis lyrata fgenesh2_kg.8__1627__AT5G57150.1 N 0.840
Bra002756 Brassica rapa Bra002756 N 0.840
Thhalv10014506m.g Eutrema salsugineum Thhalv10014506m.g N 0.840
Bra006831 Brassica rapa Bra006831 N 0.840
Bra020462 Brassica rapa Bra020462 N 0.840
Bo9g130890 Brassica oleracea Bo9g130890 N 0.840
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.840
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.840
Bo3g019430 Brassica oleracea Bo3g019430 N 0.840
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.840
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.840
30198.m000869 Ricinus communis 30198.m000869 I 0.840
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.840
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.840
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.840
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.840
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.840
Cagra.1569s0024 Capsella grandiflora Cagra.1569s0024 N 0.840
Bostr.26833s0543 Boechera stricta Bostr.26833s0543 N 0.840
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.840
Pm008898 Prunus mume Pm008898 I 0.840
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.840
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.840
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.840
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.840
MDP0000133262 Malus domestica MDP0000133262 I 0.840
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.840
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.840
MDP0000318229 Malus domestica MDP0000318229 I 0.840
TCM_039471 Theobroma cacao TCM_039471 I 0.840
AMTR_s00096p00160080 Amborella trichopoda AMTR_s00096p00160080 I 0.839
Gorai.011G019900 Gossypium raimondii Gorai.011G019900 N 0.838