CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.G01783
(
Eucalyptus grandis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Eucgr.G01783
T049654_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.884
0.816
SCRM
M09784_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ICE1_01
0.877
0.796
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.G01783.1
bHLH
306
354
HSKNLQAERRRRKKLNDRLYNLRSLVPKISKLDRASILGDAIEYIMELQ
Links
Other
bHLH
family TFs
Other
Eucalyptus grandis
TFs
247 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_20.95
Carica papaya
evm.TU.supercontig_20.95
I
0.914
VIT_01s0127g00860
Vitis vinifera
VIT_01s0127g00860
I
0.914
POPTR_0018s13830
Populus trichocarpa
POPTR_0018s13830
I
0.911
SapurV1A.3355s0020
Salix purpurea
SapurV1A.3355s0020
I
0.911
SapurV1A.0140s0250
Salix purpurea
SapurV1A.0140s0250
I
0.911
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.901
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.901
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.901
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.901
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.901
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.901
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.898
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.898
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.898
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.898
TCM_006602
Theobroma cacao
TCM_006602
I
0.894
PK03241.1
Cannabis sativa
PK03241.1
I
0.894
SapurV1A.3355s0010
Salix purpurea
SapurV1A.3355s0010
I
0.887
POPTR_0018s13850
Populus trichocarpa
POPTR_0018s13850
I
0.887
SapurV1A.0140s0240
Salix purpurea
SapurV1A.0140s0240
I
0.887
Ca_23693
Cicer arietinum
Ca_23693
I
0.884
Ca_05416
Cicer arietinum
Ca_05416
I
0.884
Ca_23694
Cicer arietinum
Ca_23694
I
0.884
GLYMA20G24170
Glycine max
GLYMA20G24170
I
0.884
Bra002004
Brassica rapa
Bra002004
I
0.884
MDP0000405748
Malus domestica
MDP0000405748
I
0.884
Cagra.10862s0002
Capsella grandiflora
Cagra.10862s0002
I
0.884
Bostr.18351s0148
Boechera stricta
Bostr.18351s0148
I
0.884
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.884
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.884
Bo3g091780
Brassica oleracea
Bo3g091780
I
0.884
GLYMA10G42830
Glycine max
GLYMA10G42830
I
0.884
MTR_1g112680
Medicago truncatula
MTR_1g112680
I
0.884
AMS
Arabidopsis thaliana
AT2G16910
D
0.884
Thhalv10022620m.g
Eutrema salsugineum
Thhalv10022620m.g
I
0.884
Bo7g016210
Brassica oleracea
Bo7g016210
I
0.884
LjSGA_106153.1
Lotus japonicus
LjSGA_106153.1
I
0.884
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.884
Bra013041
Brassica rapa
Bra013041
I
0.884
AMS
Arabidopsis lyrata
fgenesh2_kg.3__3272__AT2G16910.1
I
0.884
Carubv10016240m.g
Capsella rubella
Carubv10016240m.g
I
0.884
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.881
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.881
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.881
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.881
Cla016068
Citrullus lanatus
Cla016068
I
0.881
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.881
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.881
SapurV1A.0001s2820
Salix purpurea
SapurV1A.0001s2820
I
0.881
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.881
POPTR_0018s13840
Populus trichocarpa
POPTR_0018s13840
I
0.881
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.878
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.878
Solyc03g118310.2
Solanum lycopersicum
Solyc03g118310.2
I
0.877
SELMODRAFT_138758
Selaginella moellendorffii
SELMODRAFT_138758
I
0.877
Gorai.007G072600
Gossypium raimondii
Gorai.007G072600
I
0.877
TCM_014741
Theobroma cacao
TCM_014741
I
0.877
Sb03g044660
Sorghum bicolor
Sb03g044660
I
0.877
PRUPE_ppa018220mg
Prunus persica
PRUPE_ppa018220mg
I
0.877
PRUPE_ppa005038mg
Prunus persica
PRUPE_ppa005038mg
I
0.877
MDP0000304669
Malus domestica
MDP0000304669
I
0.877
Sb05g019530
Sorghum bicolor
Sb05g019530
I
0.877
SELMODRAFT_75047
Selaginella moellendorffii
SELMODRAFT_75047
I
0.877
SELMODRAFT_119431
Selaginella moellendorffii
SELMODRAFT_119431
I
0.877
SELMODRAFT_91237
Selaginella moellendorffii
SELMODRAFT_91237
I
0.877
SELMODRAFT_94010
Selaginella moellendorffii
SELMODRAFT_94010
I
0.877
MDP0000247912
Malus domestica
MDP0000247912
I
0.877
TCM_017336
Theobroma cacao
TCM_017336
I
0.877
Si001874m.g
Setaria italica
Si001874m.g
I
0.877
Si026212m.g
Setaria italica
Si026212m.g
I
0.877
VIT_17s0000g00330
Vitis vinifera
VIT_17s0000g00330
I
0.877
cassava37254.valid.m1
Manihot esculenta
cassava37254.valid.m1
I
0.877
Eucgr.G01938
Eucalyptus grandis
Eucgr.G01938
I
0.877
Cucsa.134750
Cucumis sativus
Cucsa.134750
I
0.877
cassava17838.valid.m1
Manihot esculenta
cassava17838.valid.m1
I
0.877
30147.m014419
Ricinus communis
30147.m014419
I
0.877
Pm024587
Prunus mume
Pm024587
I
0.877
Aquca_100_00035
Aquilegia coerulea
Aquca_100_00035
I
0.877
Cucsa.156040
Cucumis sativus
Cucsa.156040
I
0.877
estExt_fgenesh1_pg.C_300202
Physcomitrella patens
estExt_fgenesh1_pg.C_300202
I
0.877
Ciclev10015052m.g
Citrus clementina
Ciclev10015052m.g
I
0.877
Carubv10017099m.g
Capsella rubella
Carubv10017099m.g
I
0.877
mgf016462m
Mimulus guttatus
mgf016462m
I
0.877
mgf015974m
Mimulus guttatus
mgf015974m
I
0.877
estExt_Genewise1.C_510113
Physcomitrella patens
estExt_Genewise1.C_510113
I
0.877
mgf012194m
Mimulus guttatus
mgf012194m
I
0.877
Pm016093
Prunus mume
Pm016093
I
0.877
evm.TU.supercontig_70.77
Carica papaya
evm.TU.supercontig_70.77
I
0.877
Traes_7DL_2A7EF919F
Triticum aestivum
Traes_7DL_2A7EF919F
I
0.877
gene06435-v1.0-hybrid
Fragaria vesca
gene06435-v1.0-hybrid
I
0.877
Traes_7BL_BF5300D88
Triticum aestivum
Traes_7BL_BF5300D88
I
0.877
Traes_7AL_ACAC47D88
Triticum aestivum
Traes_7AL_ACAC47D88
I
0.877
Gorai.007G044800
Gossypium raimondii
Gorai.007G044800
I
0.877
Gorai.001G275600
Gossypium raimondii
Gorai.001G275600
I
0.877
TRIUR3_17003
Triticum urartu
TRIUR3_17003
I
0.877
Bostr.13671s0164
Boechera stricta
Bostr.13671s0164
I
0.877
Cla002682
Citrullus lanatus
Cla002682
I
0.877
Cla003283
Citrullus lanatus
Cla003283
I
0.877
Bostr.0556s0344
Boechera stricta
Bostr.0556s0344
I
0.877
Ca_01394
Cicer arietinum
Ca_01394
I
0.877
VIT_01s0244g00130
Vitis vinifera
VIT_01s0244g00130
I
0.877
VIT_14s0068g01200
Vitis vinifera
VIT_14s0068g01200
I
0.877
TRAES3BF001100060CFD_g
Triticum aestivum
TRAES3BF001100060CFD_g
I
0.877
orange1.1g011370m.g
Citrus sinensis
orange1.1g011370m.g
I
0.877
GLYMA16G05390
Glycine max
GLYMA16G05390
I
0.877
GLYMA19G27483
Glycine max
GLYMA19G27483
I
0.877
GRMZM2G033356
Zea mays
GRMZM2G033356
I
0.877
PK06841.1
Cannabis sativa
PK06841.1
I
0.877
GLYMA06G17330
Glycine max
GLYMA06G17330
I
0.877
ICE1
Arabidopsis lyrata
fgenesh2_kg.5__441__AT3G26744.2
I
0.877
GLYMA04G37750
Glycine max
GLYMA04G37750
I
0.877
PK06940.1
Cannabis sativa
PK06940.1
I
0.877
GRMZM2G172297
Zea mays
GRMZM2G172297
I
0.877
GRMZM2G173534
Zea mays
GRMZM2G173534
I
0.877
POPTR_0015s11650
Populus trichocarpa
POPTR_0015s11650
I
0.877
LPERR11G11940
Leersia perrieri
LPERR11G11940
I
0.877
MLOC_46407
Hordeum vulgare
MLOC_46407
I
0.877
GSMUA_Achr6G08070_001
Musa acuminata
GSMUA_Achr6G08070_001
I
0.877
Thhalv10004059m.g
Eutrema salsugineum
Thhalv10004059m.g
I
0.877
GSMUA_Achr10G12060_001
Musa acuminata
GSMUA_Achr10G12060_001
I
0.877
GSMUA_Achr10G18380_001
Musa acuminata
GSMUA_Achr10G18380_001
I
0.877
Thhalv10007566m.g
Eutrema salsugineum
Thhalv10007566m.g
I
0.877
chr1.CM1880.50.nc
Lotus japonicus
chr1.CM1880.50.nc
I
0.877
F775_14780
Aegilops tauschii
F775_14780
I
0.877
Bo00285s440
Brassica oleracea
Bo00285s440
I
0.877
Bo5g016510
Brassica oleracea
Bo5g016510
I
0.877
Bo7g083870
Brassica oleracea
Bo7g083870
I
0.877
BGIOSGA035358
Oryza indica
BGIOSGA035358
I
0.877
BGIOSGA000206
Oryza indica
BGIOSGA000206
I
0.877
AMTR_s00016p00170610
Amborella trichopoda
AMTR_s00016p00170610
I
0.877
SCRM2
Arabidopsis thaliana
AT1G12860
I
0.877
SCRM
Arabidopsis thaliana
AT3G26744
D
0.877
Bo8g065080
Brassica oleracea
Bo8g065080
I
0.877
Bo9g008020
Brassica oleracea
Bo9g008020
I
0.877
Bra034246
Brassica rapa
Bra034246
I
0.877
BRADI2G59497
Brachypodium distachyon
BRADI2G59497
I
0.877
LjSGA_024382.1
Lotus japonicus
LjSGA_024382.1
I
0.877
Bra032947
Brassica rapa
Bra032947
I
0.877
Bra025226
Brassica rapa
Bra025226
I
0.877
Bra016749
Brassica rapa
Bra016749
I
0.877
Bra019794
Brassica rapa
Bra019794
I
0.877
MLOC_76805
Hordeum vulgare
MLOC_76805
I
0.877
LPERR01G37160
Leersia perrieri
LPERR01G37160
I
0.877
ORGLA01G0363500
Oryza glaberrima
ORGLA01G0363500
I
0.877
Pavir.Eb03736
Panicum virgatum
Pavir.Eb03736
I
0.877
ORGLA11G0129200
Oryza glaberrima
ORGLA11G0129200
I
0.877
MTR_3g498695
Medicago truncatula
MTR_3g498695
I
0.877
Pavir.Hb00982
Panicum virgatum
Pavir.Hb00982
I
0.877
ONIVA12G10770
Oryza nivara
ONIVA12G10770
I
0.877
OPUNC01G41620
Oryza punctata
OPUNC01G41620
I
0.877
ORUFI01G46010
Oryza rufipogon
ORUFI01G46010
I
0.877
Pavir.Ea03858
Panicum virgatum
Pavir.Ea03858
I
0.877
Cagra.23157s0001
Capsella grandiflora
Cagra.23157s0001
I
0.877
MDP0000662999
Malus domestica
MDP0000662999
I
0.877
POPTR_0012s10780
Populus trichocarpa
POPTR_0012s10780
I
0.877
OS11G0523700
Oryza sativa
OS11G0523700
I
0.877
orange1.1g047004m.g
Citrus sinensis
orange1.1g047004m.g
I
0.877
ORUFI11G16280
Oryza rufipogon
ORUFI11G16280
I
0.877
OS01G0928000
Oryza sativa
OS01G0928000
I
0.877
ONIVA01G48650
Oryza nivara
ONIVA01G48650
I
0.877
OPUNC11G12640
Oryza punctata
OPUNC11G12640
I
0.877
SapurV1A.0774s0030
Salix purpurea
SapurV1A.0774s0030
I
0.877
OGLUM11G14700
Oryza glumaepatula
OGLUM11G14700
I
0.877
SapurV1A.0517s0250
Salix purpurea
SapurV1A.0517s0250
I
0.877
OBART11G15260
Oryza barthii
OBART11G15260
I
0.877
SapurV1A.0672s0200
Salix purpurea
SapurV1A.0672s0200
I
0.877
OBART01G42600
Oryza barthii
OBART01G42600
I
0.877
OMERI01G39590
Oryza meridionalis
OMERI01G39590
I
0.877
OGLUM01G46870
Oryza glumaepatula
OGLUM01G46870
I
0.877
OMERI11G12580
Oryza meridionalis
OMERI11G12580
I
0.877
VIT_03s0038g02540
Vitis vinifera
VIT_03s0038g02540
I
0.874
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.871
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.871
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.871
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.871
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.871
Gorai.008G036900
Gossypium raimondii
Gorai.008G036900
I
0.870
Solyc08g062780.1
Solanum lycopersicum
Solyc08g062780.1
I
0.870
PGSC0003DMG400008195
Solanum tuberosum
PGSC0003DMG400008195
I
0.870
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.868
Si006500m.g
Setaria italica
Si006500m.g
I
0.868
Ca_23892
Cicer arietinum
Ca_23892
I
0.866
Pavir.Ha01426
Panicum virgatum
Pavir.Ha01426
I
0.866
MTR_7g083900
Medicago truncatula
MTR_7g083900
I
0.866
GSMUA_Achr11G09640_001
Musa acuminata
GSMUA_Achr11G09640_001
I
0.866
Pm020879
Prunus mume
Pm020879
I
0.864
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.864
mgf018455m
Mimulus guttatus
mgf018455m
I
0.860
orange1.1g045155m.g
Citrus sinensis
orange1.1g045155m.g
I
0.858
Ciclev10030105m.g
Citrus clementina
Ciclev10030105m.g
I
0.858
Pm008898
Prunus mume
Pm008898
I
0.857
PRUPE_ppa010972mg
Prunus persica
PRUPE_ppa010972mg
I
0.857
AMTR_s00096p00160080
Amborella trichopoda
AMTR_s00096p00160080
I
0.856
Si006199m.g
Setaria italica
Si006199m.g
I
0.854
Solyc05g014590.2
Solanum lycopersicum
Solyc05g014590.2
I
0.854
PGSC0003DMG400017440
Solanum tuberosum
PGSC0003DMG400017440
I
0.854
gw1.257.54.1
Physcomitrella patens
gw1.257.54.1
I
0.853
MDP0000219146
Malus domestica
MDP0000219146
I
0.853
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.851
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.851
Si019518m.g
Setaria italica
Si019518m.g
I
0.851
mgf024029m
Mimulus guttatus
mgf024029m
I
0.851
SCRM2
Arabidopsis lyrata
Al_scaffold_0001_1326
I
0.851
OBART02G01550
Oryza barthii
OBART02G01550
I
0.848
TDR
Oryza sativa
OS02G0120500
I
0.848
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.848
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.848
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.848
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.848
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.848
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.848
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.848
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.848
mgf019723m
Mimulus guttatus
mgf019723m
I
0.848
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.848
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.848
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.847
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.847
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.847
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.847
BRADI4G17460
Brachypodium distachyon
BRADI4G17460
I
0.847
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.847
Traes_4DS_7B0E8D459
Triticum aestivum
Traes_4DS_7B0E8D459
I
0.847
TRIUR3_16046
Triticum urartu
TRIUR3_16046
I
0.847
Cla023112
Citrullus lanatus
Cla023112
I
0.847
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.847
PGSC0003DMG401028788
Solanum tuberosum
PGSC0003DMG401028788
I
0.847
Solyc06g068870.2
Solanum lycopersicum
Solyc06g068870.2
I
0.847
Lus10043199.g
Linum usitatissimum
Lus10043199.g
I
0.847
F775_15875
Aegilops tauschii
F775_15875
I
0.847
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.847
Lus10032542.g
Linum usitatissimum
Lus10032542.g
I
0.847
Lus10030609.g
Linum usitatissimum
Lus10030609.g
N
0.845
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.845
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.844
OS04G0300600
Oryza sativa
OS04G0300600
N
0.843
OBART04G06800
Oryza barthii
OBART04G06800
N
0.843
ORUFI04G07840
Oryza rufipogon
ORUFI04G07840
N
0.843
SELMODRAFT_77288
Selaginella moellendorffii
SELMODRAFT_77288
N
0.843
OPUNC04G05620
Oryza punctata
OPUNC04G05620
N
0.843
ORGLA04G0051300
Oryza glaberrima
ORGLA04G0051300
N
0.843
OMERI03G04040
Oryza meridionalis
OMERI03G04040
N
0.843
OGLUM04G06590
Oryza glumaepatula
OGLUM04G06590
N
0.843
cassava7475.valid.m1
Manihot esculenta
cassava7475.valid.m1
I
0.842
30131.m006993
Ricinus communis
30131.m006993
I
0.842
GSMUA_Achr3G00640_001
Musa acuminata
GSMUA_Achr3G00640_001
N
0.841
MDP0000243628
Malus domestica
MDP0000243628
I
0.839