CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000243628
(
Malus domestica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
MDP0000243628
T050389_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.839
0.583
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000243628
bHLH
152
199
LNNVEEERQRRKKLNQRFYPLRAVVPNISKMDKASLLGDAITYITDLQ
Links
Other
bHLH
family TFs
Other
Malus domestica
TFs
150 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf024029m
Mimulus guttatus
mgf024029m
I
0.902
Gorai.009G002200
Gossypium raimondii
Gorai.009G002200
I
0.902
MLOC_52192
Hordeum vulgare
MLOC_52192
I
0.882
Pavir.Ab00204
Panicum virgatum
Pavir.Ab00204
I
0.882
Sb04g001650
Sorghum bicolor
Sb04g001650
I
0.882
Si019518m.g
Setaria italica
Si019518m.g
I
0.882
BRADI3G01910
Brachypodium distachyon
BRADI3G01910
I
0.882
Traes_6AS_4C2F64614
Triticum aestivum
Traes_6AS_4C2F64614
I
0.882
mgf019723m
Mimulus guttatus
mgf019723m
I
0.879
GLYMA16G26291
Glycine max
GLYMA16G26291
I
0.879
gene23715-v1.0-hybrid
Fragaria vesca
gene23715-v1.0-hybrid
I
0.879
OBART02G01550
Oryza barthii
OBART02G01550
I
0.879
GSMUA_Achr7G16000_001
Musa acuminata
GSMUA_Achr7G16000_001
I
0.879
ONIVA02G01430
Oryza nivara
ONIVA02G01430
I
0.879
TDR
Oryza sativa
OS02G0120500
I
0.879
Si006500m.g
Setaria italica
Si006500m.g
I
0.879
ORUFI02G01530
Oryza rufipogon
ORUFI02G01530
I
0.879
ORGLA02G0014200
Oryza glaberrima
ORGLA02G0014200
I
0.879
OMERI02G00890
Oryza meridionalis
OMERI02G00890
I
0.879
OPUNC02G01010
Oryza punctata
OPUNC02G01010
I
0.879
OGLUM02G01420
Oryza glumaepatula
OGLUM02G01420
I
0.879
GSMUA_Achr10G23370_001
Musa acuminata
GSMUA_Achr10G23370_001
I
0.879
BGIOSGA007229
Oryza indica
BGIOSGA007229
I
0.879
Bra006831
Brassica rapa
Bra006831
N
0.878
Bostr.26833s0543
Boechera stricta
Bostr.26833s0543
N
0.878
Bra020462
Brassica rapa
Bra020462
N
0.878
Bo9g130890
Brassica oleracea
Bo9g130890
N
0.878
Bo3g019430
Brassica oleracea
Bo3g019430
N
0.878
Thhalv10014506m.g
Eutrema salsugineum
Thhalv10014506m.g
N
0.878
AT5G57150
Arabidopsis thaliana
AT5G57150
N
0.878
Cagra.1569s0024
Capsella grandiflora
Cagra.1569s0024
N
0.878
Bra002756
Brassica rapa
Bra002756
N
0.878
fgenesh2_kg.8__1627__AT5G57150.1
Arabidopsis lyrata
fgenesh2_kg.8__1627__AT5G57150.1
N
0.878
PRUPE_ppa022211mg
Prunus persica
PRUPE_ppa022211mg
I
0.869
Pm020879
Prunus mume
Pm020879
I
0.869
AMS
Populus trichocarpa
POPTR_0009s13860
I
0.869
SapurV1A.0218s0460
Salix purpurea
SapurV1A.0218s0460
I
0.869
gene23716-v1.0-hybrid
Fragaria vesca
gene23716-v1.0-hybrid
I
0.869
Lus10030880.g
Linum usitatissimum
Lus10030880.g
N
0.866
SapurV1A.0140s0210
Salix purpurea
SapurV1A.0140s0210
I
0.858
Cla023112
Citrullus lanatus
Cla023112
I
0.858
GLYMA09G06770
Glycine max
GLYMA09G06770
I
0.858
gene17273-v1.0-hybrid
Fragaria vesca
gene17273-v1.0-hybrid
I
0.858
30198.m000869
Ricinus communis
30198.m000869
I
0.858
PGSC0003DMG400004087
Solanum tuberosum
PGSC0003DMG400004087
I
0.858
VIT_11s0052g00100
Vitis vinifera
VIT_11s0052g00100
I
0.858
GLYMA05G38530
Glycine max
GLYMA05G38530
I
0.858
Solyc07g018010.2
Solanum lycopersicum
Solyc07g018010.2
I
0.858
POPTR_0018s13860
Populus trichocarpa
POPTR_0018s13860
I
0.858
cassava2997.m1
Manihot esculenta
cassava2997.m1
I
0.858
Traes_6AS_66A98BA55
Triticum aestivum
Traes_6AS_66A98BA55
I
0.858
TCM_039471
Theobroma cacao
TCM_039471
I
0.858
orange1.1g025665m.g
Citrus sinensis
orange1.1g025665m.g
I
0.858
Cagra.0568s0207
Capsella grandiflora
Cagra.0568s0207
I
0.858
Lus10006951.g
Linum usitatissimum
Lus10006951.g
I
0.858
Cucsa.088960
Cucumis sativus
Cucsa.088960
I
0.858
GLYMA17G06610
Glycine max
GLYMA17G06610
I
0.858
Carubv10009081m.g
Capsella rubella
Carubv10009081m.g
I
0.858
GRMZM2G042893
Zea mays
GRMZM2G042893
N
0.858
Eucgr.C02208
Eucalyptus grandis
Eucgr.C02208
I
0.858
Ciclev10009285m.g
Citrus clementina
Ciclev10009285m.g
I
0.858
Aquca_018_00039
Aquilegia coerulea
Aquca_018_00039
I
0.858
GLYMA15G18070
Glycine max
GLYMA15G18070
I
0.858
MDP0000318229
Malus domestica
MDP0000318229
I
0.858
MDP0000133262
Malus domestica
MDP0000133262
I
0.858
Gorai.013G242800
Gossypium raimondii
Gorai.013G242800
I
0.858
GLYMA13G00480
Glycine max
GLYMA13G00480
I
0.858
MTR_2g038040
Medicago truncatula
MTR_2g038040
I
0.858
GRMZM2G139372
Zea mays
GRMZM2G139372
N
0.856
BRADI3G01901
Brachypodium distachyon
BRADI3G01901
I
0.856
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
0.855
Si010812m.g
Setaria italica
Si010812m.g
N
0.855
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
0.855
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
0.855
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
0.855
Si010413m.g
Setaria italica
Si010413m.g
N
0.855
MLOC_62844
Hordeum vulgare
MLOC_62844
N
0.855
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N
0.855
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
0.855
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
0.855
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
0.855
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
0.855
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
0.855
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
0.855
GRMZM2G119823
Zea mays
GRMZM2G119823
I
0.855
OS04G0301500
Oryza sativa
OS04G0301500
N
0.855
GRMZM2G042895
Zea mays
GRMZM2G042895
N
0.855
Sb07g004190
Sorghum bicolor
Sb07g004190
N
0.855
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
0.854
e_gw1.25.105.1
Physcomitrella patens
e_gw1.25.105.1
I
0.852
PDK_20s1347451g001
Phoenix dactylifera
PDK_20s1347451g001
I
0.852
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.852
estExt_fgenesh1_pg.C_1590022
Physcomitrella patens
estExt_fgenesh1_pg.C_1590022
I
0.852
Cucsa.010660
Cucumis sativus
Cucsa.010660
I
0.852
SELMODRAFT_451590
Selaginella moellendorffii
SELMODRAFT_451590
I
0.852
Aquca_019_00147
Aquilegia coerulea
Aquca_019_00147
I
0.852
SELMODRAFT_430203
Selaginella moellendorffii
SELMODRAFT_430203
I
0.852
Cla016068
Citrullus lanatus
Cla016068
I
0.852
evm.TU.supercontig_1024.1
Carica papaya
evm.TU.supercontig_1024.1
I
0.852
SELMODRAFT_16038
Selaginella moellendorffii
SELMODRAFT_16038
I
0.852
SELMODRAFT_16039
Selaginella moellendorffii
SELMODRAFT_16039
I
0.852
GSMUA_Achr1G07330_001
Musa acuminata
GSMUA_Achr1G07330_001
I
0.852
PGSC0003DMG400014246
Solanum tuberosum
PGSC0003DMG400014246
I
0.852
GSMUA_Achr1G07450_001
Musa acuminata
GSMUA_Achr1G07450_001
I
0.852
Aquca_072_00056
Aquilegia coerulea
Aquca_072_00056
I
0.849
estExt_fgenesh1_pg.C_1240017
Physcomitrella patens
estExt_fgenesh1_pg.C_1240017
I
0.849
POPTR_0006s07420
Populus trichocarpa
POPTR_0006s07420
I
0.849
fgenesh1_pg.scaffold_1000274
Physcomitrella patens
fgenesh1_pg.scaffold_1000274
I
0.849
estExt_gwp_gw1.C_1820005
Physcomitrella patens
estExt_gwp_gw1.C_1820005
I
0.849
gw1.90.96.1
Physcomitrella patens
gw1.90.96.1
I
0.849
SapurV1A.0001s2810
Salix purpurea
SapurV1A.0001s2810
N
0.847
mgf018455m
Mimulus guttatus
mgf018455m
I
0.845
cassava2551.valid.m1
Manihot esculenta
cassava2551.valid.m1
I
0.845
cassava2552.valid.m1
Manihot esculenta
cassava2552.valid.m1
I
0.845
LPERR04G04510
Leersia perrieri
LPERR04G04510
N
0.844
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
0.842
Eucgr.H02387
Eucalyptus grandis
Eucgr.H02387
N
0.842
Thhalv10027332m.g
Eutrema salsugineum
Thhalv10027332m.g
N
0.841
BHLH27
Arabidopsis thaliana
AT4G29930
N
0.841
Bo7g114110
Brassica oleracea
Bo7g114110
N
0.841
Bra024115
Brassica rapa
Bra024115
N
0.841
Bo1g014720
Brassica oleracea
Bo1g014720
N
0.841
Bra011152
Brassica rapa
Bra011152
N
0.841
Bostr.7867s0840
Boechera stricta
Bostr.7867s0840
N
0.841
Carubv10006422m.g
Capsella rubella
Carubv10006422m.g
N
0.841
Cagra.0268s0010
Capsella grandiflora
Cagra.0268s0010
N
0.841
Ca_23693
Cicer arietinum
Ca_23693
I
0.839
Ca_05416
Cicer arietinum
Ca_05416
I
0.839
Ca_23694
Cicer arietinum
Ca_23694
I
0.839
MTR_1g112680
Medicago truncatula
MTR_1g112680
I
0.839
Bo3g091780
Brassica oleracea
Bo3g091780
I
0.839
AMS
Arabidopsis thaliana
AT2G16910
D
0.839
Thhalv10022620m.g
Eutrema salsugineum
Thhalv10022620m.g
I
0.839
TCM_006602
Theobroma cacao
TCM_006602
I
0.839
LjSGA_106153.1
Lotus japonicus
LjSGA_106153.1
I
0.839
PK03241.1
Cannabis sativa
PK03241.1
I
0.839
VIT_01s0127g00860
Vitis vinifera
VIT_01s0127g00860
I
0.839
Bostr.18351s0148
Boechera stricta
Bostr.18351s0148
I
0.839
Bo7g016210
Brassica oleracea
Bo7g016210
I
0.839
evm.TU.supercontig_20.95
Carica papaya
evm.TU.supercontig_20.95
I
0.839
Carubv10016240m.g
Capsella rubella
Carubv10016240m.g
I
0.839
AMS
Arabidopsis lyrata
fgenesh2_kg.3__3272__AT2G16910.1
I
0.839
GLYMA10G42830
Glycine max
GLYMA10G42830
I
0.839
GLYMA20G24170
Glycine max
GLYMA20G24170
I
0.839
Bra013041
Brassica rapa
Bra013041
I
0.839
Eucgr.G01783
Eucalyptus grandis
Eucgr.G01783
I
0.839
Cagra.10862s0002
Capsella grandiflora
Cagra.10862s0002
I
0.839
MDP0000405748
Malus domestica
MDP0000405748
I
0.839
Bra002004
Brassica rapa
Bra002004
I
0.839
fgenesh2_kg.7__1196__AT4G29930.1
Arabidopsis lyrata
fgenesh2_kg.7__1196__AT4G29930.1
N
0.838