CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G019900
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.011G019900
T050090_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G019900.1
bHLH
19
67
KSKNLQAERRRRQKLSDRLLTLRSLVPIITNMNKATIIDDAITYIQELQ
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava15938.m1
Manihot esculenta
cassava15938.m1
N
0.885
Ca_22008
Cicer arietinum
Ca_22008
N
0.870
29842.m003700
Ricinus communis
29842.m003700
N
0.870
orange1.1g042649m.g
Citrus sinensis
orange1.1g042649m.g
I
0.870
LjT46I09.60.nd
Lotus japonicus
LjT46I09.60.nd
I
0.870
GLYMA15G06950
Glycine max
GLYMA15G06950
I
0.870
chr4.CM1616.440.nc
Lotus japonicus
chr4.CM1616.440.nc
I
0.870
PRUPE_ppa021593mg
Prunus persica
PRUPE_ppa021593mg
N
0.864
cassava21844.m1
Manihot esculenta
cassava21844.m1
N
0.860
Cagra.1062s0003
Capsella grandiflora
Cagra.1062s0003
I
0.855
Carubv10007380m.g
Capsella rubella
Carubv10007380m.g
I
0.855
orange1.1g045155m.g
Citrus sinensis
orange1.1g045155m.g
I
0.852
Ciclev10030105m.g
Citrus clementina
Ciclev10030105m.g
I
0.852
MTR_4g091910
Medicago truncatula
MTR_4g091910
I
0.843
GLYMA13G32370
Glycine max
GLYMA13G32370
I
0.843
AMTR_s00019p00254380
Amborella trichopoda
AMTR_s00019p00254380
I
0.838