Pavir.Ba01985 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ba01985 T050686_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01985.1.p bHLH 33 81
Pavir.Ba01985.2.p bHLH 33 81

Links

Other bHLH family TFs
Other Panicum virgatum TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc02g076920.2 Solanum lycopersicum Solyc02g076920.2 I 0.847
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.860
PGSC0003DMG400010208 Solanum tuberosum PGSC0003DMG400010208 I 0.847
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.860
OS08G0477900 Oryza sativa OS08G0477900 N 0.884
Sb02g026920 Sorghum bicolor Sb02g026920 N 0.912
Sb07g023280 Sorghum bicolor Sb07g023280 N 0.884
Si014356m.g Setaria italica Si014356m.g N 0.884
Si033077m.g Setaria italica Si033077m.g N 0.912
BGIOSGA028855 Oryza indica BGIOSGA028855 N 0.884
Traes_2AL_7A37B5232 Triticum aestivum Traes_2AL_7A37B5232 N 0.860
Traes_2BL_649181D92 Triticum aestivum Traes_2BL_649181D92 N 0.860
Pavir.J16121 Panicum virgatum Pavir.J16121 N 0.914
Pavir.Fa00651 Panicum virgatum Pavir.Fa00651 N 0.864
MDP0000562627 Malus domestica MDP0000562627 N 0.842
mgf022146m Mimulus guttatus mgf022146m N 0.845
TRIUR3_09991 Triticum urartu TRIUR3_09991 N 0.860
Traes_5BL_553BE31FE Triticum aestivum Traes_5BL_553BE31FE N 0.849
Traes_2DL_5F0BD9D6F Triticum aestivum Traes_2DL_5F0BD9D6F N 0.860
ORUFI08G20260 Oryza rufipogon ORUFI08G20260 N 0.884
ORGLA08G0157100 Oryza glaberrima ORGLA08G0157100 N 0.884
BGIOSGA030928 Oryza indica BGIOSGA030928 N 0.847
BRADI3G38360 Brachypodium distachyon BRADI3G38360 N 0.864
BRADI4G32470 Brachypodium distachyon BRADI4G32470 N 0.869
F775_02130 Aegilops tauschii F775_02130 N 0.860
GRMZM2G082630 Zea mays GRMZM2G082630 N 0.884
GRMZM2G113257 Zea mays GRMZM2G113257 N 0.912
GRMZM2G145146 Zea mays GRMZM2G145146 N 0.912
GSMUA_Achr3G06780_001 Musa acuminata GSMUA_Achr3G06780_001 N 0.879
GSMUA_Achr9G15140_001 Musa acuminata GSMUA_Achr9G15140_001 N 0.879
LPERR08G15030 Leersia perrieri LPERR08G15030 N 0.884
MLOC_2366 Hordeum vulgare MLOC_2366 N 0.845
MLOC_70640 Hordeum vulgare MLOC_70640 N 0.860
OB08G25230 Oryza brachyantha OB08G25230 N 0.884
OGLUM08G19000 Oryza glumaepatula OGLUM08G19000 N 0.884
OMERI09G10230 Oryza meridionalis OMERI09G10230 N 0.884
ONIVA08G20180 Oryza nivara ONIVA08G20180 N 0.884
OPUNC08G16020 Oryza punctata OPUNC08G16020 N 0.884
Pavir.J25149 Panicum virgatum Pavir.J25149 N 0.864