SMU15033768 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15033768 T051719_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.869 0.865
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.869 0.865
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.869 0.865
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.869 0.865
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.869 0.865
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.849 0.808
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.849 0.808
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.849 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15033768 bHLH 62 114

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KGM_14030 Danaus plexippus KGM_14030 I 0.893
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.873
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.873
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.873
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.873
AMEC009154 Anopheles melas AMEC009154 I 0.873
ACUA004590 Anopheles culicifacies ACUA004590 I 0.873
AMEM011331 Anopheles merus AMEM011331 I 0.873
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.873
ASIS019386 Anopheles sinensis ASIS019386 I 0.873
AMIN003266 Anopheles minimus AMIN003266 I 0.873
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.873
AMAM018725 Anopheles maculatus AMAM018725 I 0.873
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.873
AFUN008310 Anopheles funestus AFUN008310 I 0.873
AATE014019 Anopheles atroparvus AATE014019 I 0.873
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.873
AGAP001448 Anopheles gambiae AGAP001448 I 0.873
ADAC008497 Anopheles darlingi ADAC008497 I 0.873
ACOM034154 Anopheles coluzzii ACOM034154 I 0.873
ACHR004799 Anopheles christyi ACHR004799 I 0.873
AALB002674 Anopheles albimanus AALB002674 I 0.873
AARA001906 Anopheles arabiensis AARA001906 I 0.873
AFAF002909 Anopheles farauti AFAF002909 I 0.873
AEPI006242 Anopheles epiroticus AEPI006242 I 0.873
ADIR010545 Anopheles dirus ADIR010545 I 0.873
D917_00545 Trichinella nativa D917_00545 I 0.869
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.869
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.869
ISCW003737 Ixodes scapularis ISCW003737 I 0.869
L798_11980 Zootermopsis nevadensis L798_11980 I 0.869
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.869
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.869
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.869
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.869
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.869
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.869
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.869
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.869
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.869
PHUM498120 Pediculus humanus PHUM498120 I 0.869
SMAR009985 Strigamia maritima SMAR009985 I 0.869
SMAR011911 Strigamia maritima SMAR011911 I 0.869
TC014105 Tribolium castaneum TC014105 I 0.869
LotgiG66849 Lottia gigantea LotgiG66849 I 0.869
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.869
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.869
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.869
PTF1A Homo sapiens ENSG00000168267 D 0.869
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.869
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.869
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.869
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.869
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.869
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.869
PTF1A Equus caballus ENSECAG00000012711 I 0.869
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.869
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.869
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.869
EFV58245 Trichinella spiralis EFV58245 I 0.869
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.869
PTF1A Bos taurus ENSBTAG00000047315 I 0.869
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.869
ptf1a Danio rerio ENSDARG00000014479 I 0.869
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.869
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.869
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.869
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.869
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.869
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.869
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.869
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.869
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.869
PTF1A Sus scrofa ENSSSCG00000030662 I 0.869
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.869
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.869
Ptf1a Mus musculus ENSMUSG00000026735 D 0.869
PTF1A Otolemur garnettii ENSOGAG00000024685 I 0.869
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.869
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.869
ptf1a Oryzias latipes ENSORLG00000008277 I 0.869
PTF1A Procavia capensis ENSPCAG00000005440 I 0.869
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.869
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.868
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.849
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.849
T265_12589 Opisthorchis viverrini T265_12589 I 0.849
D918_01499 Trichuris suis D918_01499 I 0.849
MDOA013156 Musca domestica MDOA013156 I 0.849
csin111295 Clonorchis sinensis csin111295 I 0.849
D915_00775 Fasciola hepatica D915_00775 I 0.849
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.849
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.849
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.849
GI23061 Drosophila mojavensis FBgn0145788 I 0.849
GH19006 Drosophila grimshawi FBgn0126473 I 0.849
GL12422 Drosophila persimilis FBgn0150028 I 0.849
GM10936 Drosophila sechellia FBgn0165881 I 0.849
GD19915 Drosophila simulans FBgn0191398 I 0.849
GG13863 Drosophila erecta FBgn0106126 I 0.849
GF17655 Drosophila ananassae FBgn0094673 I 0.849
AAEL008660 Aedes aegypti AAEL008660 I 0.849
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.849
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.849
Fer1 Drosophila melanogaster FBgn0037475 D 0.849
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.849
GJ24574 Drosophila virilis FBgn0211653 I 0.849
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.849
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.849
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.849
CLEC012470 Cimex lectularius CLEC012470 I 0.849
GK14521 Drosophila willistoni FBgn0216527 I 0.849
RPRC001881 Rhodnius prolixus RPRC001881 I 0.849
GE24907 Drosophila yakuba FBgn0242002 I 0.849
HelroG86431 Helobdella robusta HelroG86431 I 0.849
MESCA008421 Megaselia scalaris MESCA008421 I 0.849
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.849
LCUP002382 Lucilia cuprina LCUP002382 I 0.849
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.846
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.845
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.845