CBG05538 (Caenorhabditis briggsae)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 CBG05538 T055521_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Y44A6D.3
M00590_2.00 		Caenorhabditis elegans
NYGCGCRRN
NYYGCGCRN		 PBM
Narasimhan et al.(2015)
pTH10696 		0.827 0.827
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG05538 Brinker 18 69

Links

Other Brinker family TFs
Other Caenorhabditis briggsae TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE21236 Caenorhabditis remanei CRE21236 I 0.906
CBN19762 Caenorhabditis brenneri CBN19762 I 0.904
Y44A6D.3 Caenorhabditis elegans WBGene00012854 D 0.904
CGOC_0000345301 Cylicostephanus goldi CGOC_0000345301 I 0.830
ANCCAN_18878 Ancylostoma caninum ANCCAN_18878 I 0.792
ANCDUO_21609 Ancylostoma duodenale ANCDUO_21609 I 0.792
NBR_0001584001 Nippostrongylus brasiliensis NBR_0001584001 N 0.765
ACAC_0000945701 Angiostrongylus cantonensis ACAC_0000945701 N 0.750
ANCCEY_14798 Ancylostoma ceylanicum ANCCEY_14798 N 0.750
NECAME_08042 Necator americanus NECAME_08042 N 0.745
NBR_0002149901 Nippostrongylus brasiliensis NBR_0002149901 N 0.731
HPBE_0001384101 Heligmosomoides bakeri HPBE_0001384101 N 0.731
OESDEN_01522 Oesophagostomum dentatum OESDEN_01522 N 0.731
DICVIV_05295 Dictyocaulus viviparus DICVIV_05295 N 0.731
PPA12559 Pristionchus pacificus PPA12559 N 0.725
nAv.1.0.1.g02361 Acanthocheilonema viteae nAv.1.0.1.g02361 N 0.714
HCOI02081600 Haemonchus contortus HCOI02081600 N 0.712
CJA08473 Caenorhabditis japonica CJA08473 I 0.712
CJA36020 Caenorhabditis japonica CJA36020 I 0.712
nDi.2.2.2.g11238 Dirofilaria immitis nDi.2.2.2.g11238 I 0.710
DME_0000033301 Dracunculus medinensis DME_0000033301 N 0.708
Hba_18627 Heterorhabditis bacteriophora Hba_18627 I 0.706
ACOC_0000968101 Angiostrongylus costaricensis ACOC_0000968101 N 0.706
nLs.2.1.2.g08792 Litomosoides sigmodontis nLs.2.1.2.g08792 N 0.700
ASIM_0001398401 Anisakis simplex ASIM_0001398401 N 0.700
Bm6553 Brugia malayi Bm6553 N 0.700
WUBG_06876 Wuchereria bancrofti WUBG_06876 N 0.700
GPUH_0001120501 Gongylonema pulchrum GPUH_0001120501 N 0.700