CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN19762
(
Caenorhabditis brenneri
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF09607 (BrkDBD)
IPR018586
CBN19762
T055525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y44A6D.3
M00590_2.00
Caenorhabditis elegans
NYGCGCRRN
NYYGCGCRN
PBM
Narasimhan et al.(2015)
pTH10696
0.865
0.865
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN19762
Brinker
18
69
TLKQYSIDEKLTIISHAKNHGNRAAGREFNVAESSIREWRKNENKLIHNRNN
Links
Other
Brinker
family TFs
Other
Caenorhabditis brenneri
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE21236
Caenorhabditis remanei
CRE21236
I
0.962
Y44A6D.3
Caenorhabditis elegans
WBGene00012854
D
0.942
CBG05538
Caenorhabditis briggsae
CBG05538
I
0.904
CJA36020
Caenorhabditis japonica
CJA36020
I
0.750
HPBE_0001384101
Heligmosomoides bakeri
HPBE_0001384101
N
0.750
CGOC_0000345301
Cylicostephanus goldi
CGOC_0000345301
I
0.750
CJA08473
Caenorhabditis japonica
CJA08473
I
0.750
NBR_0001584001
Nippostrongylus brasiliensis
NBR_0001584001
N
0.731
NECAME_08042
Necator americanus
NECAME_08042
N
0.731
OESDEN_01522
Oesophagostomum dentatum
OESDEN_01522
N
0.731
NBR_0002149901
Nippostrongylus brasiliensis
NBR_0002149901
N
0.731
ANCDUO_21609
Ancylostoma duodenale
ANCDUO_21609
I
0.731
ACAC_0000945701
Angiostrongylus cantonensis
ACAC_0000945701
N
0.731
ANCCAN_18878
Ancylostoma caninum
ANCCAN_18878
I
0.731
ANCCEY_14798
Ancylostoma ceylanicum
ANCCEY_14798
N
0.731
DICVIV_05295
Dictyocaulus viviparus
DICVIV_05295
N
0.731
PPA12559
Pristionchus pacificus
PPA12559
N
0.712
HCOI02081600
Haemonchus contortus
HCOI02081600
N
0.712
DME_0000033301
Dracunculus medinensis
DME_0000033301
N
0.708