CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HLF
(
Callithrix jacchus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSCJAG00000011298
T059228_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.896
1.000
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.896
1.000
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.896
1.000
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.896
1.000
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.896
1.000
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.896
1.000
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.896
1.000
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.896
1.000
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.847
0.794
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.847
0.794
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.847
0.794
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.847
0.794
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.847
0.794
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.847
0.794
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.847
0.794
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.847
0.794
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.847
0.794
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.795
0.683
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.795
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000020807
bZIP
224
286
KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA
ENSCJAP00000046414
bZIP
139
201
KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA
Links
Other
bZIP
family TFs
Other
Callithrix jacchus
TFs
233 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL014286
Aedes aegypti
AAEL014286
I
0.000
AALB001524
Anopheles albimanus
AALB001524
I
0.000
AARA004970
Anopheles arabiensis
AARA004970
N
0.000
AATE004999
Anopheles atroparvus
AATE004999
N
0.000
ACHR001068
Anopheles christyi
ACHR001068
N
0.000
ACOM030425
Anopheles coluzzii
ACOM030425
N
0.000
ACUA005970
Anopheles culicifacies
ACUA005970
N
0.000
ACYPI005393
Acyrthosiphon pisum
ACYPI005393
N
0.000
ADAC005010
Anopheles darlingi
ADAC005010
I
0.000
ADIR011315
Anopheles dirus
ADIR011315
N
0.000
AEPI008902
Anopheles epiroticus
AEPI008902
N
0.000
AFAF000916
Anopheles farauti
AFAF000916
N
0.000
AFUN003983
Anopheles funestus
AFUN003983
N
0.000
AGAP008160
Anopheles gambiae
AGAP008160
N
0.000
AMEC009973
Anopheles melas
AMEC009973
N
0.000
AMEC012340
Anopheles melas
AMEC012340
N
0.000
AMEM015420
Anopheles merus
AMEM015420
N
0.000
AMIN006115
Anopheles minimus
AMIN006115
N
0.000
AQUA000993
Anopheles quadriannulatus
AQUA000993
N
0.000
ASTEI09594
Anopheles stephensi
ASTEI09594
N
0.000
BGIBMGA013826
Bombyx mori
BGIBMGA013826
N
0.000
Cflo_09641--XP_393231.3_APIME
Camponotus floridanus
Cflo_09641--XP_393231.3_APIME
I
0.000
CLEC001097
Cimex lectularius
CLEC001097
N
0.000
CPIJ004862
Culex quinquefasciatus
CPIJ004862
I
0.000
CpipJ_CPIJ004862
Culex pipiens
CpipJ_CPIJ004862
I
0.000
GB44791
Apis mellifera
GB44791
I
0.000
GD24674
Drosophila simulans
FBgn0196001
I
0.000
GE16012
Drosophila yakuba
FBgn0233564
I
0.000
GF19984
Drosophila ananassae
FBgn0096991
I
0.000
GG19364
Drosophila erecta
FBgn0111568
I
0.000
GH11855
Drosophila grimshawi
FBgn0119334
I
0.000
GI14170
Drosophila mojavensis
FBgn0136923
I
0.000
GJ18431
Drosophila virilis
FBgn0205590
I
0.000
GK16252
Drosophila willistoni
FBgn0218254
I
0.000
GL24710
Drosophila persimilis
FBgn0162298
I
0.000
GM22518
Drosophila sechellia
FBgn0177388
I
0.000
HMEL017165
Heliconius melpomene
HMEL017165
I
0.000
KGM_15963
Danaus plexippus
KGM_15963
N
0.000
L798_09102
Zootermopsis nevadensis
L798_09102
N
0.000
LCUP002256
Lucilia cuprina
LCUP002256
I
0.000
LLOJ006683
Lutzomyia longipalpis
LLOJ006683
I
0.000
MDOA009261
Musca domestica
MDOA009261
I
0.000
mybl1.L
Xenopus laevis
XB-GENE-986561
I
0.000
NEMVEDRAFT_v1g38726
Nematostella vectensis
NEMVEDRAFT_v1g38726
I
0.000
NV17529
Nasonia vitripennis
NV17529
N
0.000
PHUM518530
Pediculus humanus
PHUM518530
N
0.000
PPAI005590
Phlebotomus papatasi
PPAI005590
I
0.000
TC030738
Tribolium castaneum
TC030738
N
0.000
YQE_02334
Dendroctonus ponderosae
YQE_02334
N
0.000