Tef (Rattus norvegicus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSRNOG00000019383 T061319_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
basic region/leucine zipper (bZIP) transcription factor; binds and transactivates thyroid-stimulating hormone beta (Tshb) [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN

NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.891 1.000
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN

NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.891 1.000
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN

NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.891 1.000
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN

NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.891 1.000
TEF
M09983_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.834 0.918
TEF
M09984_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.891 1.000
TEF
M09985_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.891 1.000
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY

RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.891 1.000
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN

NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.891 1.000
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN

NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.847 0.781
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN

NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.847 0.781
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.847 0.781
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB

VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.801 0.754
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS

SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.847 0.781
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH

DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.847 0.781
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY

RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.847 0.781
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN

NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.847 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000026258 bZIP 229 292
ENSRNOP00000072259 bZIP 229 289

Links

Other bZIP family TFs
Other Rattus norvegicus TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TEF Pteropus vampyrus ENSPVAG00000001160 I 0.891
TEF Felis catus ENSFCAG00000003674 I 0.891
TEF Pan troglodytes ENSPTRG00000014425 I 0.891
TEF Homo sapiens ENSG00000167074 D 0.891
ENSPPYG00000011867 Pongo abelii ENSPPYG00000011867 I 0.891
ENSPSIG00000006835 Pelodiscus sinensis ENSPSIG00000006835 I 0.891
ENSFALG00000011967 Ficedula albicollis ENSFALG00000011967 I 0.891
TEF Sorex araneus ENSSARG00000003323 I 0.891
Tef Dipodomys ordii ENSDORG00000014982 I 0.891
TEF Taeniopygia guttata ENSTGUG00000009944 I 0.891
TEF Tupaia belangeri ENSTBEG00000010576 I 0.891
TEF Equus caballus ENSECAG00000018137 I 0.891
ENSSHAG00000009361 Sarcophilus harrisii ENSSHAG00000009361 I 0.891
Tef Mus musculus ENSMUSG00000022389 D 0.891
TEF Gallus gallus ENSGALG00000011958 I 0.891
TEF Gorilla gorilla ENSGGOG00000016460 I 0.891
ENSOARG00000018238 Ovis aries ENSOARG00000018238 I 0.891
TEF Macaca mulatta ENSMMUG00000005221 I 0.891
TEF Ornithorhynchus anatinus ENSOANG00000011535 I 0.891
TEF Monodelphis domestica ENSMODG00000016547 I 0.891
ENSMPUG00000016407 Mustela putorius furo ENSMPUG00000016407 I 0.891
ENSNLEG00000015473 Nomascus leucogenys ENSNLEG00000015473 I 0.891
TEF Oryctolagus cuniculus ENSOCUG00000012866 I 0.891
TEF Myotis lucifugus ENSMLUG00000002459 I 0.891
TEF Loxodonta africana ENSLAFG00000013151 I 0.891
ENSPANG00000024579 Papio anubis ENSPANG00000024579 I 0.891
ENSMEUG00000013604 Macropus eugenii ENSMEUG00000013604 I 0.891
TEF Meleagris gallopavo ENSMGAG00000012262 I 0.891
ENSMICG00000013518 Microcebus murinus ENSMICG00000013518 I 0.891
TEF Otolemur garnettii ENSOGAG00000025997 I 0.891
TEF Dasypus novemcinctus ENSDNOG00000035257 I 0.891
ENSSTOG00000019642 Ictidomys tridecemlineatus ENSSTOG00000019642 I 0.891
ENSBTAP00000022056-D1 Bos grunniens ENSBTAP00000022056-D1 I 0.891
ENSP00000403078 Macaca fascicularis ENSP00000403078 I 0.891
Brh_R010854 Buceros rhinoceros Brh_R010854 I 0.891
ENSAPLG00000005838 Anas platyrhynchos ENSAPLG00000005838 I 0.891
TEF Canis familiaris ENSCAFG00000001095 I 0.891
TEF Bos taurus ENSBTAG00000016580 I 0.891
Gfo_R004744 Geospiza fortis Gfo_R004744 I 0.891
Myotis_brandtii_Tef_10013968 Myotis brandtii Myotis_brandtii_Tef_10013968 I 0.891
Pvit_18616 Pogona vitticeps Pvit_18616 I 0.891
Tal_R002658 Tyto alba Tal_R002658 I 0.891
TEF Anolis carolinensis ENSACAG00000004810 I 0.891
Ogr14443 Ophisaurus gracilis Ogr14443 I 0.891
ENSAMEG00000002146 Ailuropoda melanoleuca ENSAMEG00000002146 I 0.891
Afo_R007951 Aptenodytes forsteri Afo_R007951 I 0.891
Alligator_sinensis_CCG007983.1 Alligator sinensis Alligator_sinensis_CCG007983.1 I 0.891
TEF Vicugna pacos ENSVPAG00000002612 I 0.891
TEF Callithrix jacchus ENSCJAG00000004977 I 0.891
TEF Tursiops truncatus ENSTTRG00000003365 I 0.891
Aan_R013230 Calypte anna Aan_R013230 I 0.891
ENSTSYG00000008965 Tarsius syrichta ENSTSYG00000008965 I 0.891
TEF Cavia porcellus ENSCPOG00000020591 I 0.891
ENSCSAG00000005816 Chlorocebus sabaeus ENSCSAG00000005816 I 0.891
TEF Ochotona princeps ENSOPRG00000013592 I 0.890
tefa Oryzias latipes ENSORLG00000002582 I 0.887
tefb Takifugu rubripes ENSTRUG00000003565 I 0.879
tefb Gasterosteus aculeatus ENSGACG00000007628 I 0.879
tefa Takifugu rubripes ENSTRUG00000017028 I 0.875
ENSPFOG00000016821 Poecilia formosa ENSPFOG00000016821 I 0.875
tefa Danio rerio ENSDARG00000039117 I 0.875
ENSXMAG00000000678 Xiphophorus maculatus ENSXMAG00000000678 I 0.875
tefa Tetraodon nigroviridis ENSTNIG00000012940 I 0.875
ENSAMXG00000017639 Astyanax mexicanus ENSAMXG00000017639 I 0.873
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I 0.870
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I 0.866
tefb Oryzias latipes ENSORLG00000014144 I 0.866
ENSLACG00000012701 Latimeria chalumnae ENSLACG00000012701 I 0.864
ENSONIG00000019694 Oreochromis niloticus ENSONIG00000019694 I 0.863
ENSONIG00000008480 Oreochromis niloticus ENSONIG00000008480 I 0.863
tefb Danio rerio ENSDARG00000098103 I 0.860
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I 0.859
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I 0.859
hlfa Oryzias latipes ENSORLG00000000969 I 0.859
tefa Gasterosteus aculeatus ENSGACG00000004793 I 0.858
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I 0.858
Ogr00037 Ophisaurus gracilis Ogr00037 I 0.856
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I 0.854
TEF Choloepus hoffmanni ENSCHOG00000009442 I 0.851
ENSXMAG00000012903 Xiphophorus maculatus ENSXMAG00000012903 I 0.849
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I 0.847
HLF Echinops telfairi ENSETEG00000017670 I 0.847
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I 0.847
Hlf Rattus norvegicus ENSRNOG00000002456 I 0.847
HLF Homo sapiens ENSG00000108924 D 0.847
HLF Tursiops truncatus ENSTTRG00000007194 I 0.847
HLF Pan troglodytes ENSPTRG00000009424 I 0.847
HLF Erinaceus europaeus ENSEEUG00000010964 I 0.847
HLF Felis catus ENSFCAG00000022556 I 0.847
HLF Pteropus vampyrus ENSPVAG00000007461 I 0.847
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I 0.847
HLF Callithrix jacchus ENSCJAG00000011298 I 0.847
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I 0.847
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I 0.847
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I 0.847
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I 0.847
Hlf Mus musculus ENSMUSG00000003949 D 0.847
HLF Canis familiaris ENSCAFG00000030851 I 0.847
HLF Tupaia belangeri ENSTBEG00000006958 I 0.847
HLF Equus caballus ENSECAG00000016953 I 0.847
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I 0.847
HLF Bos taurus ENSBTAG00000006618 I 0.847
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I 0.847
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I 0.847
HLF Ochotona princeps ENSOPRG00000004195 I 0.847
HLF Loxodonta africana ENSLAFG00000016475 I 0.847
HLF Oryctolagus cuniculus ENSOCUG00000010547 I 0.847
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I 0.847
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I 0.847
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I 0.847
HLF Otolemur garnettii ENSOGAG00000007056 I 0.847
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I 0.847
HLF Myotis lucifugus ENSMLUG00000007393 I 0.847
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I 0.847
HLF Macaca mulatta ENSMMUG00000022627 I 0.847
ENSP00000226067 Macaca fascicularis ENSP00000226067 I 0.847
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I 0.847
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I 0.847
HLF Monodelphis domestica ENSMODG00000014851 I 0.847
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I 0.847
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I 0.847
HLF Gorilla gorilla ENSGGOG00000006075 I 0.847
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I 0.847
Afo_R002997 Aptenodytes forsteri Afo_R002997 I 0.844
Aan_R004902 Calypte anna Aan_R004902 I 0.844
Tal_R009182 Tyto alba Tal_R009182 I 0.844
HLF Anolis carolinensis ENSACAG00000017417 I 0.844
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I 0.844
Gfo_R006518 Geospiza fortis Gfo_R006518 I 0.844
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I 0.844
ENSGMOG00000004830 Gadus morhua ENSGMOG00000004830 I 0.844
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I 0.844
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I 0.844
Brh_R008067 Buceros rhinoceros Brh_R008067 I 0.844
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I 0.844
HLF Taeniopygia guttata ENSTGUG00000009478 I 0.844
HLF Gallus gallus ENSGALG00000003059 I 0.844
Pvit_00680 Pogona vitticeps Pvit_00680 I 0.844
hlfa Danio rerio ENSDARG00000074752 I 0.842
ENSXMAG00000016939 Xiphophorus maculatus ENSXMAG00000016939 I 0.837
ENSTNIG00000003545 Tetraodon nigroviridis ENSTNIG00000003545 I 0.836
tef.S Xenopus laevis XB-GENE-962737 I 0.836
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I 0.835
Alligator_sinensis_CCG020587.1 Alligator sinensis Alligator_sinensis_CCG020587.1 I 0.832
HLF Ornithorhynchus anatinus ENSOANG00000010288 I 0.832
hlfb Takifugu rubripes ENSTRUG00000003909 I 0.831
XP_002937859 Xenopus tropicalis XP_002937859 I 0.829
hlf Xenopus tropicalis XB-GENE-955698 I 0.829
ENSGMOG00000013327 Gadus morhua ENSGMOG00000013327 I 0.825
SPU_004414 Strongylocentrotus purpuratus SPU_004414 I 0.823
dbp.L Xenopus laevis XB-GENE-6256610 I 0.823
hlfa Tetraodon nigroviridis ENSTNIG00000011274 I 0.822
hlfb Danio rerio ENSDARG00000061011 I 0.822
hlfa Takifugu rubripes ENSTRUG00000003731 I 0.822
hlfb Gasterosteus aculeatus ENSGACG00000010103 I 0.818
CGI_10008414 Crassostrea gigas CGI_10008414 I 0.813
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I 0.808
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I 0.808
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I 0.807
ENSTNIG00000002167 Tetraodon nigroviridis ENSTNIG00000002167 I 0.807
Ocbimv22024947m.g Octopus bimaculoides Ocbimv22024947m.g I 0.805
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I 0.805
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I 0.805
tef Xenopus tropicalis XB-GENE-962732 I 0.803
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I 0.801
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I 0.801
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I 0.801
dbpa Danio rerio ENSDARG00000063014 I 0.801
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I 0.800
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I 0.800
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I 0.800
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I 0.800
AATE006511 Anopheles atroparvus AATE006511 I 0.797
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I 0.794
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I 0.794
CapteG151518 Capitella teleta CapteG151518 I 0.789
ISCW004978 Ixodes scapularis ISCW004978 I 0.789
ENSXMAG00000014158 Xiphophorus maculatus ENSXMAG00000014158 I 0.786
HHAL005759-PA Halyomorpha halys HHAL005759-PA I 0.786
MCINX004280 Melitaea cinxia MCINX004280 I 0.784
tetur19g00770 Tetranychus urticae tetur19g00770 I 0.784
HMEL011029 Heliconius melpomene HMEL011029 I 0.784
BGIBMGA003874 Bombyx mori BGIBMGA003874 I 0.784
KGM_21614 Danaus plexippus KGM_21614 I 0.784
SMAR002779 Strigamia maritima SMAR002779 I 0.783