CPRF1_PETCR (Petroselinum crispum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 CPRF1_PETCR T070481_2.00 HughesLab (2013-Jun-13)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CPRF1_PETCR
M10066_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
(Direct) (Direct)
CPRF1_PETCR
M10067_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
(Direct) (Direct)
CPRF1_PETCR
M10068_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN

NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.819 0.750
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.818 0.750
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.818 0.750
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.807 0.641
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA

TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.807 0.641
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD

HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.807 0.703
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD

HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.807 0.703
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA

TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.807 0.703
CPRF3_PETCR
M10071_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_01
0.805 0.516
CPRF3_PETCR
M10072_2.00
Petroselinum crispum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_Q2
0.805 0.516
Q40645_ORYSA
M10050_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.805 0.703
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.805 0.703
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.791 0.578
GBF1
M09913_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.791 0.578
GBF1
M09914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.791 0.578
GBF1
M09915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.791 0.578
GBF1
M09916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.791 0.578
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND

HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.790 0.609
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR

YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.790 0.609
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN

NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.788 0.594
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRF1_PETCR bZIP 267 330

Links

Other bZIP family TFs
Other Petroselinum crispum TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GBF1 Arabidopsis thaliana AT4G36730 D 0.791
Q40645_ORYSA Oryza sativa Q40645_ORYSA D 0.805
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D 0.818
PK09653.1 Cannabis sativa PK09653.1 D 0.819
CPRF3_PETCR Petroselinum crispum CPRF3_PETCR D 0.805
GBF2 Arabidopsis thaliana AT4G01120 D 0.788
GBF3 Arabidopsis thaliana AT2G46270 D 0.807
BZIP16 Arabidopsis thaliana AT2G35530 D 0.807
BZIP68 Arabidopsis thaliana AT1G32150 D 0.790
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D 0.805
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.798
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.793
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I 0.786
Cucsa.322110 Cucumis sativus Cucsa.322110 I 0.787
Cucsa.312800 Cucumis sativus Cucsa.312800 I 0.785
Cucsa.258940 Cucumis sativus Cucsa.258940 I 0.807
Cucsa.104970 Cucumis sativus Cucsa.104970 I 0.812
cassava46468.m1 Manihot esculenta cassava46468.m1 I 0.822
mgf000639m Mimulus guttatus mgf000639m I 0.801
mgf003302m Mimulus guttatus mgf003302m I 0.803
mgf005151m Mimulus guttatus mgf005151m I 0.801
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I 0.790
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I 0.784
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.788
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I 0.807
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.791
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I 0.784
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I 0.786
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.807
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I 0.797
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I 0.802
mgf014804m Mimulus guttatus mgf014804m I 0.801
mgf013423m Mimulus guttatus mgf013423m I 0.803
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.785
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I 0.822
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I 0.822
Ca_15839 Cicer arietinum Ca_15839 I 0.790
Ca_11455 Cicer arietinum Ca_11455 I 0.785
Ca_01293 Cicer arietinum Ca_01293 I 0.804
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I 0.816
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I 0.786
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.831
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I 0.782
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I 0.785
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I 0.788
TRIUR3_31142 Triticum urartu TRIUR3_31142 I 0.788
Ca_17787 Cicer arietinum Ca_17787 I 0.801
Cla008988 Citrullus lanatus Cla008988 I 0.787
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I 0.822
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I 0.815
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I 0.815
30174.m008698 Ricinus communis 30174.m008698 I 0.817
29646.m001068 Ricinus communis 29646.m001068 I 0.785
Pm026586 Prunus mume Pm026586 I 0.808
Pm018422 Prunus mume Pm018422 I 0.803
Cla021500 Citrullus lanatus Cla021500 I 0.807
Cla016502 Citrullus lanatus Cla016502 I 0.785
Cla014415 Citrullus lanatus Cla014415 I 0.812
TRIUR3_18341 Triticum urartu TRIUR3_18341 I 0.805
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I 0.794
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I 0.814
Pavir.J01411 Panicum virgatum Pavir.J01411 I 0.787
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I 0.807
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I 0.786
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I 0.794
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I 0.794
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I 0.784
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.808
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I 0.801
MDP0000545420 Malus domestica MDP0000545420 I 0.805
MDP0000493795 Malus domestica MDP0000493795 I 0.805
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I 0.787
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I 0.807
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.812
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I 0.787
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I 0.796
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I 0.790
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I 0.784
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I 0.785
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I 0.801
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I 0.783
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.804
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.803
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I 0.790
MDP0000286846 Malus domestica MDP0000286846 I 0.783
MDP0000231274 Malus domestica MDP0000231274 I 0.820
MDP0000185553 Malus domestica MDP0000185553 I 0.783
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.821
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I 0.798
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I 0.785
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I 0.803
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.799
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.808
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I 0.801
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I 0.784
Carubv10023434m.g Capsella rubella Carubv10023434m.g I 0.807
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.791
Carubv10001247m.g Capsella rubella Carubv10001247m.g I 0.784
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I 0.783
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I 0.783
MDP0000138052 Malus domestica MDP0000138052 I 0.805
Lus10005146.g Linum usitatissimum Lus10005146.g I 0.802
Lus10003034.g Linum usitatissimum Lus10003034.g I 0.802
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.818
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I 0.803
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.811
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.792
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I 0.819
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I 0.803
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I 0.787
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I 0.806
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.791
OB07G15280 Oryza brachyantha OB07G15280 I 0.794
GRMZM5G848942 Zea mays GRMZM5G848942 I 0.788
GRMZM2G358701 Zea mays GRMZM2G358701 I 0.788
GRMZM2G171370 Zea mays GRMZM2G171370 I 0.794
GRMZM2G160136 Zea mays GRMZM2G160136 I 0.788
GRMZM2G117851 Zea mays GRMZM2G117851 I 0.805
GRMZM2G095078 Zea mays GRMZM2G095078 I 0.794
GRMZM2G011932 Zea mays GRMZM2G011932 I 0.788
GLYMA19G44190 Glycine max GLYMA19G44190 I 0.786
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.805
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.785
GLYMA16G03190 Glycine max GLYMA16G03190 I 0.805
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I 0.783
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I 0.783
OB05G33790 Oryza brachyantha OB05G33790 I 0.805
OB01G34490 Oryza brachyantha OB01G34490 I 0.805
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.805
MTR_8g070820 Medicago truncatula MTR_8g070820 I 0.788
MTR_7g116890 Medicago truncatula MTR_7g116890 I 0.804
MTR_5g028850 Medicago truncatula MTR_5g028850 I 0.787
MLOC_6711 Hordeum vulgare MLOC_6711 I 0.805
LPERR07G06120 Leersia perrieri LPERR07G06120 I 0.794
LPERR05G21930 Leersia perrieri LPERR05G21930 I 0.805
LPERR01G21580 Leersia perrieri LPERR01G21580 I 0.805
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I 0.783
GLYMA09G34170 Glycine max GLYMA09G34170 I 0.787
GLYMA07G06620 Glycine max GLYMA07G06620 I 0.803
GLYMA03G41590 Glycine max GLYMA03G41590 I 0.786
Bra004550 Brassica rapa Bra004550 I 0.807
Bo9g003700 Brassica oleracea Bo9g003700 I 0.783
Bo4g183320 Brassica oleracea Bo4g183320 I 0.791
Bo4g038560 Brassica oleracea Bo4g038560 I 0.819
Bo4g010410 Brassica oleracea Bo4g010410 I 0.807
Bo1g005460 Brassica oleracea Bo1g005460 I 0.798
BGIOSGA025382 Oryza indica BGIOSGA025382 I 0.794
BGIOSGA020389 Oryza indica BGIOSGA020389 I 0.788
BGIOSGA001085 Oryza indica BGIOSGA001085 I 0.805
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I 0.811
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I 0.795
Bra005335 Brassica rapa Bra005335 I 0.815
Bra010572 Brassica rapa Bra010572 I 0.804
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.805
GLYMA01G38381 Glycine max GLYMA01G38381 I 0.794
GLYMA01G01740 Glycine max GLYMA01G01740 I 0.792
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I 0.790
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I 0.807
F775_07803 Aegilops tauschii F775_07803 I 0.805
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I 0.805
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I 0.813
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I 0.788
Bra037382 Brassica rapa Bra037382 I 0.783
Bra011701 Brassica rapa Bra011701 I 0.798
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I 0.784
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I 0.805
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I 0.794
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I 0.794
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.791
Sb09g028990 Sorghum bicolor Sb09g028990 I 0.805
Sb03g030050 Sorghum bicolor Sb03g030050 I 0.804
Sb02g006350 Sorghum bicolor Sb02g006350 I 0.794
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.808
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I 0.803
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I 0.798
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I 0.831
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I 0.833
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I 0.809
Si001929m.g Setaria italica Si001929m.g I 0.805
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I 0.805
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I 0.805
TCM_005210 Theobroma cacao TCM_005210 I 0.803
TCM_000436 Theobroma cacao TCM_000436 I 0.804
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I 0.783
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I 0.833
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.819
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.815
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I 0.830
Si030123m.g Setaria italica Si030123m.g I 0.794
Si022388m.g Setaria italica Si022388m.g I 0.805
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.819
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I 0.830
OS07G0209800 Oryza sativa OS07G0209800 I 0.794
OMERI07G05820 Oryza meridionalis OMERI07G05820 I 0.794
OMERI03G30340 Oryza meridionalis OMERI03G30340 I 0.805
OMERI01G23000 Oryza meridionalis OMERI01G23000 I 0.805
OLONG_022047 Oryza longistaminata OLONG_022047 I 0.805
OLONG_021599 Oryza longistaminata OLONG_021599 I 0.794
OLONG_003667 Oryza longistaminata OLONG_003667 I 0.805
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I 0.794
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I 0.805
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I 0.805
OBART07G07070 Oryza barthii OBART07G07070 I 0.794
OBART05G26280 Oryza barthii OBART05G26280 I 0.805
ONIVA01G28540 Oryza nivara ONIVA01G28540 I 0.805
ONIVA05G28290 Oryza nivara ONIVA05G28290 I 0.788
OS05G0569300 Oryza sativa OS05G0569300 I 0.805
OS01G0658900 Oryza sativa OS01G0658900 I 0.805
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I 0.794
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I 0.805
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I 0.805
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I 0.805
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I 0.805
OPUNC07G06790 Oryza punctata OPUNC07G06790 I 0.794
OPUNC05G23850 Oryza punctata OPUNC05G23850 I 0.788
OPUNC01G25140 Oryza punctata OPUNC01G25140 I 0.805
ONIVA07G05320 Oryza nivara ONIVA07G05320 I 0.794
OBART01G25300 Oryza barthii OBART01G25300 I 0.805