CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TGA1A_TOBAC
(
Nicotiana tabacum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
TGA1A_TOBAC
T070491_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA1A_TOBAC
M10081_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2_01
(Direct)
(Direct)
TGA1A_TOBAC
M10082_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA1A
M02662_2.00
Nicotiana sp.
TGACGTD
HACGTCA
SELEX
Mathelier et al.(2014)
MA0129.1
0.794
1.000
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGA1A_TOBAC
bZIP
71
120
PVEKVLRRLAQNREAARKSRLRKKAYVQQLENSKLKLIQLEQELERARKQ
Links
Other
bZIP
family TFs
Other
Nicotiana tabacum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy