CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30045481m.g
(
Saccoglossus kowalevskii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Sakowv30045481m.g
T071330_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
kay
M03637_2.00
Drosophila melanogaster
NKATGASTCATMV
BKATGASTCATMN
SELEX
Nitta et al.(2015)
kay_1
0.822
0.524
kay
M03638_2.00
Drosophila melanogaster
GATGACGTCATM
KATGACGTCATC
SELEX
Nitta et al.(2015)
kay_2
0.822
0.524
kay
M06019_2.00
Drosophila melanogaster
DMTGASTCAYS
SRTGASTCAKH
B1H
Zhu et al.(2011)
kay_Jra_SANGER_5_FBgn0001297
0.822
0.524
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23915353_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915354_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915355_peptide
bZIP
174
236
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915356_peptide
bZIP
145
207
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
23915357_peptide
bZIP
120
182
SERVKRKVRRERNKVAAAKCRQKRVDQTNTLVGETEEWEEKNRILQNEIAKLEKQKEQLQFLL
Links
Other
bZIP
family TFs
Other
Saccoglossus kowalevskii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPU_021172
Strongylocentrotus purpuratus
SPU_021172
I
0.849
LCUP001382
Lucilia cuprina
LCUP001382
I
0.846
MDOA009979
Musca domestica
MDOA009979
I
0.841
PPAI002071
Phlebotomus papatasi
PPAI002071
I
0.836
kay
Drosophila erecta
FBgn0103990
I
0.826
kay
Drosophila sechellia
FBgn0167757
I
0.822
kay
Drosophila simulans
FBgn0192899
I
0.822
kay
Drosophila melanogaster
FBgn0001297
D
0.822
TC011870
Tribolium castaneum
TC011870
I
0.820
LotgiG89661
Lottia gigantea
LotgiG89661
I
0.818
Ocbimv22024895m.g
Octopus bimaculoides
Ocbimv22024895m.g
I
0.817
YQE_01933
Dendroctonus ponderosae
YQE_01933
I
0.814
kay
Drosophila mojavensis
FBgn0133190
I
0.814
HelroG162248
Helobdella robusta
HelroG162248
I
0.808
kay
Drosophila willistoni
FBgn0213935
I
0.806
HelroG194288
Helobdella robusta
HelroG194288
I
0.804
CapteG170504
Capitella teleta
CapteG170504
I
0.802
kay
Drosophila ananassae
FBgn0100369
I
0.802
kay
Drosophila virilis
FBgn0197920
I
0.801
kay
Drosophila persimilis
FBgn0161311
I
0.800
kay
Drosophila pseudoobscura
FBgn0265601
I
0.800
kay
Drosophila yakuba
FBgn0241033
I
0.793
kay
Drosophila grimshawi
FBgn0121807
I
0.786
CGI_10013436
Crassostrea gigas
CGI_10013436
I
0.785