Carubv10021012m.g (Capsella rubella)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Carubv10021012m.g T071588_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP44
M06756_2.00 		Arabidopsis thaliana
DWGMTGACGTGGC
GCCACGTCAKCWH		 Dap-seq
OMalley et al.(2016)
bZIP44_colamp_a 		0.782 0.944
BZIP44
M06757_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGCM
KGCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP44_col 		0.782 0.944
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10021012m bZIP 40 93

Links

Other bZIP family TFs
Other Capsella rubella TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0799s0011 Capsella grandiflora Cagra.0799s0011 I 0.831
Bostr.3288s0189 Boechera stricta Bostr.3288s0189 I 0.792
AtbZIP44 Arabidopsis lyrata scaffold_202483.1 I 0.782
BZIP44 Arabidopsis thaliana AT1G75390 D 0.782